Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE12937 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 12 1 NVE3568 5.12 35.6 70.9% feature · violin
Cluster 12 2 NVE15043 3.75 31.2 67.4% feature · violin
Cluster 12 3 NVE19743 3.32 30.3 74.2% feature · violin
Cluster 12 4 NVE23561 4.98 29.9 59.9% feature · violin
Cluster 12 5 NVE17746 4.85 27.5 54.8% feature · violin
Cluster 12 6 NVE20630 3.34 27.3 64.0% feature · violin
Cluster 12 7 NVE16447 3.02 26.8 76.2% feature · violin
Cluster 12 8 NVE9490 2.39 24.2 85.9% feature · violin
Cluster 12 9 NVE20438 3.31 23.8 55.8% feature · violin
Cluster 12 10 NVE12937 6.37 22.9 43.4% feature · violin
Cluster 12 11 NVE16405 2.26 22.5 62.5% feature · violin
Cluster 12 12 NVE25544 1.98 22.0 71.7% feature · violin
Cluster 12 13 NVE5003 2.04 21.9 73.0% feature · violin
Cluster 12 14 NVE22651 2.02 21.0 66.7% feature · violin
Cluster 12 15 NVE12960 6.39 20.9 39.7% feature · violin
Cluster 12 16 NVE19282 1.11 20.7 96.8% feature · violin
Cluster 12 17 NVE21390 2.52 20.7 56.5% feature · violin
Cluster 12 18 NVE23052 1.11 20.3 91.6% feature · violin
Cluster 12 19 NVE20401 1.68 20.2 73.4% feature · violin
Cluster 12 20 NVE11968 1.79 20.0 65.1% feature · violin
Cluster 12 21 NVE18679 4.49 20.0 39.7% feature · violin
Cluster 12 22 NVE22689 1.54 19.7 77.1% feature · violin
Cluster 12 23 NVE17311 1.74 19.7 70.3% feature · violin
Cluster 12 24 NVE10626 2.49 19.7 49.8% feature · violin
Cluster 12 25 NVE11962 1.76 19.6 71.4% feature · violin
Cluster 12 26 NVE21741 1.90 19.4 58.9% feature · violin
Cluster 12 27 NVE19436 3.76 19.2 40.0% feature · violin
Cluster 12 28 NVE7441 1.57 19.2 72.3% feature · violin
Cluster 12 29 NVE21004 1.65 19.1 71.6% feature · violin
Cluster 12 30 NVE23962 1.53 19.1 72.0% feature · violin
Cluster 12 31 NVE4477 1.68 19.0 68.9% feature · violin
Cluster 12 32 NVE18993 1.68 18.7 65.2% feature · violin
Cluster 12 33 NVE15668 0.86 18.4 97.9% feature · violin
Cluster 12 34 NVE21175 1.55 18.4 72.1% feature · violin
Cluster 12 35 NVE18548 1.35 18.3 79.6% feature · violin
Cluster 12 36 NVE5828 1.97 18.2 52.9% feature · violin
Cluster 12 37 NVE17817 1.87 18.1 58.6% feature · violin
Cluster 12 38 NVE6121 1.33 17.7 76.1% feature · violin
Cluster 12 39 NVE19118 1.63 17.7 61.7% feature · violin
Cluster 12 40 NVE18987 1.61 17.6 60.5% feature · violin
Cluster 12 41 NVE339 1.22 17.6 91.7% feature · violin
Cluster 12 42 NVE16345 1.66 17.6 62.0% feature · violin
Cluster 12 43 NVE5717 2.04 17.5 48.4% feature · violin
Cluster 12 44 NVE1706 1.49 17.4 68.4% feature · violin
Cluster 12 45 NVE10060 1.65 17.4 62.3% feature · violin
Cluster 12 46 NVE20761 1.49 17.4 63.8% feature · violin
Cluster 12 47 NVE22235 1.68 17.4 56.3% feature · violin
Cluster 12 48 NVE13522 1.54 17.4 66.2% feature · violin
Cluster 12 49 NVE14577 2.16 17.4 46.7% feature · violin
Cluster 12 50 NVE24997 1.40 17.3 70.7% feature · violin
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