Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE15194 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 15 1 NVE16373 5.35 61.4 90.1% feature · violin
Cluster 15 2 NVE12346 5.07 57.5 85.0% feature · violin
Cluster 15 3 NVE8014 6.88 56.6 79.0% feature · violin
Cluster 15 4 NVE11443 6.38 54.5 77.0% feature · violin
Cluster 15 5 NVE14268 5.52 53.4 76.2% feature · violin
Cluster 15 6 NVE9490 3.65 52.3 95.0% feature · violin
Cluster 15 7 NVE19282 1.96 51.3 98.6% feature · violin
Cluster 15 8 NVE14554 7.26 51.1 70.6% feature · violin
Cluster 15 9 NVE19736 4.72 50.3 73.9% feature · violin
Cluster 15 10 NVE20091 4.40 48.5 72.4% feature · violin
Cluster 15 11 NVE15194 2.42 47.4 99.6% feature · violin
Cluster 15 12 NVE6393 3.13 47.3 85.6% feature · violin
Cluster 15 13 NVE15668 1.62 47.2 98.8% feature · violin
Cluster 15 14 NVE19743 3.73 46.9 79.5% feature · violin
Cluster 15 15 NVE5223 3.75 46.1 83.4% feature · violin
Cluster 15 16 NVE23575 3.44 45.9 76.0% feature · violin
Cluster 15 17 NVE339 2.04 45.9 95.1% feature · violin
Cluster 15 18 NVE14419 3.18 45.3 77.9% feature · violin
Cluster 15 19 NVE21004 2.70 45.2 86.6% feature · violin
Cluster 15 20 NVE12519 2.77 45.0 87.1% feature · violin
Cluster 15 21 NVE3935 2.86 44.6 87.4% feature · violin
Cluster 15 22 NVE5003 2.91 44.5 85.9% feature · violin
Cluster 15 23 NVE11962 2.81 44.4 86.5% feature · violin
Cluster 15 24 NVE17817 3.32 43.9 78.4% feature · violin
Cluster 15 25 NVE3064 2.69 43.4 84.6% feature · violin
Cluster 15 26 NVE23456 3.17 43.3 84.9% feature · violin
Cluster 15 27 NVE17311 2.64 43.1 84.5% feature · violin
Cluster 15 28 NVE19943 2.66 42.9 84.1% feature · violin
Cluster 15 29 NVE2273 3.38 42.7 72.9% feature · violin
Cluster 15 30 NVE23841 3.14 42.3 75.2% feature · violin
Cluster 15 31 NVE16345 2.77 42.1 79.6% feature · violin
Cluster 15 32 NVE10060 2.84 42.1 79.6% feature · violin
Cluster 15 33 NVE23005 2.95 42.0 73.5% feature · violin
Cluster 15 34 NVE7441 2.36 41.3 85.3% feature · violin
Cluster 15 35 NVE23956 3.31 41.3 72.6% feature · violin
Cluster 15 36 NVE13155 2.76 41.2 78.3% feature · violin
Cluster 15 37 NVE24472 3.18 41.1 70.7% feature · violin
Cluster 15 38 NVE21175 2.42 40.8 84.9% feature · violin
Cluster 15 39 NVE25544 2.58 40.6 83.9% feature · violin
Cluster 15 40 NVE16891 2.29 40.4 84.1% feature · violin
Cluster 15 41 NVE23052 1.51 40.3 94.3% feature · violin
Cluster 15 42 NVE1245 2.43 40.2 81.4% feature · violin
Cluster 15 43 NVE3078 1.97 40.0 89.6% feature · violin
Cluster 15 44 NVE11230 2.47 39.6 79.1% feature · violin
Cluster 15 45 NVE17936 3.10 39.4 66.7% feature · violin
Cluster 15 46 NVE20401 2.29 39.3 84.3% feature · violin
Cluster 15 47 NVE18224 2.35 39.2 79.0% feature · violin
Cluster 15 48 NVE23303 3.36 39.2 66.3% feature · violin
Cluster 15 49 NVE8463 2.43 39.0 80.6% feature · violin
Cluster 15 50 NVE170 5.16 38.9 55.3% feature · violin
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