Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE16297 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 14 1 NVE4682 6.34 31.8 75.3% feature · violin
Cluster 14 2 NVE23271 3.75 29.3 80.3% feature · violin
Cluster 14 3 NVE24203 5.71 28.0 68.0% feature · violin
Cluster 14 4 NVE23972 3.78 27.8 77.0% feature · violin
Cluster 14 5 NVE2876 3.40 25.4 78.6% feature · violin
Cluster 14 6 NVE15559 4.96 25.3 62.3% feature · violin
Cluster 14 7 NVE18455 3.55 24.1 66.9% feature · violin
Cluster 14 8 NVE5662 3.57 23.9 65.8% feature · violin
Cluster 14 9 NVE19591 2.37 23.8 79.8% feature · violin
Cluster 14 10 NVE10019 2.24 23.6 90.4% feature · violin
Cluster 14 11 NVE15969 2.73 23.3 78.7% feature · violin
Cluster 14 12 NVE429 4.78 22.9 56.4% feature · violin
Cluster 14 13 NVE8149 6.11 22.4 52.8% feature · violin
Cluster 14 14 NVE22525 1.95 21.5 92.7% feature · violin
Cluster 14 15 NVE7860 5.22 20.7 50.0% feature · violin
Cluster 14 16 NVE22301 5.45 19.9 48.1% feature · violin
Cluster 14 17 NVE8535 4.95 19.9 48.4% feature · violin
Cluster 14 18 NVE12889 4.49 19.7 49.1% feature · violin
Cluster 14 19 NVE15786 5.63 19.7 46.7% feature · violin
Cluster 14 20 NVE10788 3.63 19.6 53.0% feature · violin
Cluster 14 21 NVE7549 6.60 19.5 47.4% feature · violin
Cluster 14 22 NVE14933 4.60 19.3 48.0% feature · violin
Cluster 14 23 NVE25565 1.90 19.2 79.3% feature · violin
Cluster 14 24 NVE2618 1.57 19.0 98.3% feature · violin
Cluster 14 25 NVE6335 2.10 18.8 67.5% feature · violin
Cluster 14 26 NVE6588 1.99 18.4 69.9% feature · violin
Cluster 14 27 NVE12842 2.44 18.3 81.8% feature · violin
Cluster 14 28 NVE5418 2.09 18.2 75.8% feature · violin
Cluster 14 29 NVE16297 2.07 18.1 79.2% feature · violin
Cluster 14 30 NVE8534 4.61 18.0 44.6% feature · violin
Cluster 14 31 NVE17130 3.07 18.0 52.0% feature · violin
Cluster 14 32 NVE11166 2.78 18.0 55.0% feature · violin
Cluster 14 33 NVE24488 3.79 18.0 47.7% feature · violin
Cluster 14 34 NVE23145 2.01 17.3 89.1% feature · violin
Cluster 14 35 NVE5400 1.44 17.2 84.6% feature · violin
Cluster 14 36 NVE10283 2.55 17.0 65.8% feature · violin
Cluster 14 37 NVE8270 1.30 17.0 91.5% feature · violin
Cluster 14 38 NVE7771 3.19 17.0 47.5% feature · violin
Cluster 14 39 NVE2514 4.59 16.9 41.5% feature · violin
Cluster 14 40 NVE21409 1.80 16.8 81.2% feature · violin
Cluster 14 41 NVE3918 2.35 16.8 72.0% feature · violin
Cluster 14 42 NVE7853 1.51 16.7 82.8% feature · violin
Cluster 14 43 NVE18721 1.87 16.7 65.4% feature · violin
Cluster 14 44 NVE21446 5.37 16.7 39.9% feature · violin
Cluster 14 45 NVE1907 1.53 16.6 88.8% feature · violin
Cluster 14 46 NVE2671 2.11 16.5 65.8% feature · violin
Cluster 14 47 NVE8536 4.89 16.5 40.1% feature · violin
Cluster 14 48 NVE15435 2.40 16.4 68.6% feature · violin
Cluster 14 49 NVE12848 1.77 16.3 68.5% feature · violin
Cluster 14 50 NVE9410 1.57 16.2 71.9% feature · violin
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