Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE17130 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 14 1 XP_032220141.1 (NVE4682) 6.34 31.8 75.3% feature · violin
Cluster 14 2 XP_001633226.2 (NVE23271) 3.75 29.3 80.3% feature · violin
Cluster 14 3 NVE24203 not mapped 5.71 28.0 68.0% feature · violin
Cluster 14 4 NVE23972 not mapped 3.78 27.8 77.0% feature · violin
Cluster 14 5 NVE2876 not mapped 3.40 25.4 78.6% feature · violin
Cluster 14 6 XP_032226875.2 (NVE15559) 4.96 25.3 62.3% feature · violin
Cluster 14 7 NVE18455 not mapped 3.55 24.1 66.9% feature · violin
Cluster 14 8 NVE5662 not mapped 3.57 23.9 65.8% feature · violin
Cluster 14 9 NVE19591 not mapped 2.37 23.8 79.8% feature · violin
Cluster 14 10 NVE10019 not mapped 2.24 23.6 90.4% feature · violin
Cluster 14 11 NVE15969 not mapped 2.73 23.3 78.7% feature · violin
Cluster 14 12 NVE429 not mapped 4.78 22.9 56.4% feature · violin
Cluster 14 13 NVE8149 not mapped 6.11 22.4 52.8% feature · violin
Cluster 14 14 NVE22525 not mapped 1.95 21.5 92.7% feature · violin
Cluster 14 15 NVE7860 not mapped 5.22 20.7 50.0% feature · violin
Cluster 14 16 NVE22301 not mapped 5.45 19.9 48.1% feature · violin
Cluster 14 17 NVE8535 not mapped 4.95 19.9 48.4% feature · violin
Cluster 14 18 XP_032222903.1 (NVE12889) 4.49 19.7 49.1% feature · violin
Cluster 14 19 NVE15786 not mapped 5.63 19.7 46.7% feature · violin
Cluster 14 20 NVE10788 not mapped 3.63 19.6 53.0% feature · violin
Cluster 14 21 NVE7549 not mapped 6.60 19.5 47.4% feature · violin
Cluster 14 22 NVE14933 not mapped 4.60 19.3 48.0% feature · violin
Cluster 14 23 NVE25565 not mapped 1.90 19.2 79.3% feature · violin
Cluster 14 24 NVE2618 not mapped 1.57 19.0 98.3% feature · violin
Cluster 14 25 NVE6335 not mapped 2.10 18.8 67.5% feature · violin
Cluster 14 26 NVE6588 not mapped 1.99 18.4 69.9% feature · violin
Cluster 14 27 NVE12842 not mapped 2.44 18.3 81.8% feature · violin
Cluster 14 28 NVE5418 not mapped 2.09 18.2 75.8% feature · violin
Cluster 14 29 XP_032222519.2 (NVE16297) 2.07 18.1 79.2% feature · violin
Cluster 14 30 NVE8534 not mapped 4.61 18.0 44.6% feature · violin
Cluster 14 31 NVE17130 not mapped 3.07 18.0 52.0% feature · violin
Cluster 14 32 NVE11166 not mapped 2.78 18.0 55.0% feature · violin
Cluster 14 33 XP_048587879.1 (NVE24488) 3.79 18.0 47.7% feature · violin
Cluster 14 34 NVE23145 not mapped 2.01 17.3 89.1% feature · violin
Cluster 14 35 NVE5400 not mapped 1.44 17.2 84.6% feature · violin
Cluster 14 36 NVE10283 not mapped 2.55 17.0 65.8% feature · violin
Cluster 14 37 NVE8270 not mapped 1.30 17.0 91.5% feature · violin
Cluster 14 38 NVE7771 not mapped 3.19 17.0 47.5% feature · violin
Cluster 14 39 NVE2514 not mapped 4.59 16.9 41.5% feature · violin
Cluster 14 40 NVE21409 not mapped 1.80 16.8 81.2% feature · violin
Cluster 14 41 XP_032220200.2 (NVE3918) 2.35 16.8 72.0% feature · violin
Cluster 14 42 NVE7853 not mapped 1.51 16.7 82.8% feature · violin
Cluster 14 43 NVE18721 not mapped 1.87 16.7 65.4% feature · violin
Cluster 14 44 NVE21446 not mapped 5.37 16.7 39.9% feature · violin
Cluster 14 45 NVE1907 not mapped 1.53 16.6 88.8% feature · violin
Cluster 14 46 NVE2671 not mapped 2.11 16.5 65.8% feature · violin
Cluster 14 47 NVE8536 not mapped 4.89 16.5 40.1% feature · violin
Cluster 14 48 NVE15435 not mapped 2.40 16.4 68.6% feature · violin
Cluster 14 49 NVE12848 not mapped 1.77 16.3 68.5% feature · violin
Cluster 14 50 NVE9410 not mapped 1.57 16.2 71.9% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 43 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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