Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE17217 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 17 1 NVE6010 4.99 85.4 97.0% feature · violin
Cluster 17 2 NVE4448 6.08 85.0 93.8% feature · violin
Cluster 17 3 NVE17843 6.24 83.8 92.3% feature · violin
Cluster 17 4 NVE8266 6.19 82.8 91.4% feature · violin
Cluster 17 5 NVE20813 5.62 78.2 86.3% feature · violin
Cluster 17 6 NVE17842 5.22 74.7 85.1% feature · violin
Cluster 17 7 NVE17845 4.97 66.1 74.5% feature · violin
Cluster 17 8 NVE25792 3.34 65.7 85.5% feature · violin
Cluster 17 9 NVE5412 4.32 59.1 68.1% feature · violin
Cluster 17 10 NVE7724 4.10 54.7 74.9% feature · violin
Cluster 17 11 NVE12374 3.80 50.5 59.8% feature · violin
Cluster 17 12 NVE726 3.05 49.4 64.7% feature · violin
Cluster 17 13 NVE14871 2.22 48.1 81.0% feature · violin
Cluster 17 14 NVE16306 3.02 45.6 61.8% feature · violin
Cluster 17 15 NVE25082 1.82 44.1 79.1% feature · violin
Cluster 17 16 NVE20337 3.20 44.0 55.9% feature · violin
Cluster 17 17 NVE17217 3.04 43.2 55.8% feature · violin
Cluster 17 18 NVE13022 2.64 43.1 59.9% feature · violin
Cluster 17 19 NVE4331 3.24 43.0 54.1% feature · violin
Cluster 17 20 NVE13456 1.91 41.4 75.7% feature · violin
Cluster 17 21 NVE8547 2.33 41.2 61.4% feature · violin
Cluster 17 22 NVE10817 3.37 40.6 50.9% feature · violin
Cluster 17 23 NVE3113 3.12 40.4 52.1% feature · violin
Cluster 17 24 NVE23456 2.42 38.5 63.0% feature · violin
Cluster 17 25 NVE13841 2.94 36.5 47.0% feature · violin
Cluster 17 26 NVE22972 3.09 35.4 45.1% feature · violin
Cluster 17 27 NVE8333 1.95 34.9 57.3% feature · violin
Cluster 17 28 NVE17194 3.23 34.9 42.1% feature · violin
Cluster 17 29 NVE16307 1.88 34.9 59.3% feature · violin
Cluster 17 30 NVE22048 0.69 34.8 98.7% feature · violin
Cluster 17 31 NVE19817 0.74 34.3 95.6% feature · violin
Cluster 17 32 NVE21578 0.57 34.1 98.6% feature · violin
Cluster 17 33 NVE8785 3.66 34.0 39.3% feature · violin
Cluster 17 34 NVE9447 3.16 33.6 41.8% feature · violin
Cluster 17 35 NVE24745 0.77 33.4 96.4% feature · violin
Cluster 17 36 NVE7931 3.84 33.2 39.2% feature · violin
Cluster 17 37 NVE12879 0.62 32.9 98.9% feature · violin
Cluster 17 38 NVE1333 0.79 32.7 94.7% feature · violin
Cluster 17 39 NVE6308 2.75 32.2 42.2% feature · violin
Cluster 17 40 NVE10816 1.58 32.2 62.6% feature · violin
Cluster 17 41 NVE10968 1.49 32.1 69.1% feature · violin
Cluster 17 42 NVE1638 0.62 31.7 96.9% feature · violin
Cluster 17 43 NVE1903 2.97 31.5 46.0% feature · violin
Cluster 17 44 NVE6360 3.24 31.3 38.3% feature · violin
Cluster 17 45 NVE379 0.73 31.2 97.2% feature · violin
Cluster 17 46 NVE11079 1.93 30.8 52.6% feature · violin
Cluster 17 47 NVE414 0.79 30.1 92.7% feature · violin
Cluster 17 48 NVE13758 2.58 29.6 47.6% feature · violin
Cluster 17 49 NVE12051 0.41 29.6 99.9% feature · violin
Cluster 17 50 NVE10463 1.84 29.6 50.7% feature · violin
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