Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE17231 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 25 1 NVE13685 10.81 37.3 99.6% feature · violin
Cluster 25 2 NVE6210 10.79 32.5 86.7% feature · violin
Cluster 25 3 NVE6993 9.32 30.6 82.7% feature · violin
Cluster 25 4 NVE18256 9.79 29.8 79.8% feature · violin
Cluster 25 5 NVE14456 9.23 29.0 77.7% feature · violin
Cluster 25 6 NVE16591 7.07 28.5 78.1% feature · violin
Cluster 25 7 NVE17839 6.50 26.2 72.4% feature · violin
Cluster 25 8 NVE21815 9.11 25.2 67.6% feature · violin
Cluster 25 9 NVE18257 9.20 24.0 64.2% feature · violin
Cluster 25 10 NVE7065 8.18 24.0 64.4% feature · violin
Cluster 25 11 NVE4451 5.75 24.0 66.5% feature · violin
Cluster 25 12 NVE9193 8.96 23.7 63.8% feature · violin
Cluster 25 13 NVE14802 7.21 21.8 58.9% feature · violin
Cluster 25 14 NVE5222 5.40 21.7 60.8% feature · violin
Cluster 25 15 NVE17231 7.85 20.5 55.2% feature · violin
Cluster 25 16 NVE14803 7.54 20.5 55.2% feature · violin
Cluster 25 17 NVE9443 2.32 19.3 74.1% feature · violin
Cluster 25 18 NVE9331 2.05 18.7 82.1% feature · violin
Cluster 25 19 NVE5259 0.88 18.7 98.9% feature · violin
Cluster 25 20 NVE20452 2.49 18.1 68.4% feature · violin
Cluster 25 21 NVE10151 0.87 18.0 98.9% feature · violin
Cluster 25 22 NVE23993 0.85 18.0 100.0% feature · violin
Cluster 25 23 NVE17226 1.76 17.8 80.8% feature · violin
Cluster 25 24 NVE18895 7.00 17.7 48.0% feature · violin
Cluster 25 25 NVE4703 1.35 17.6 93.9% feature · violin
Cluster 25 26 NVE12326 5.08 17.3 48.4% feature · violin
Cluster 25 27 NVE2822 1.29 17.2 95.2% feature · violin
Cluster 25 28 NVE20682 1.13 17.1 97.5% feature · violin
Cluster 25 29 NVE20630 2.86 16.9 60.8% feature · violin
Cluster 25 30 NVE22308 0.80 16.8 99.8% feature · violin
Cluster 25 31 NVE6125 7.98 16.2 43.6% feature · violin
Cluster 25 32 NVE8767 1.41 16.2 87.2% feature · violin
Cluster 25 33 NVE23963 0.64 15.9 99.2% feature · violin
Cluster 25 34 NVE3143 1.22 15.9 92.6% feature · violin
Cluster 25 35 NVE26074 1.16 15.7 91.6% feature · violin
Cluster 25 36 NVE11676 1.51 15.4 78.7% feature · violin
Cluster 25 37 NVE6578 1.44 15.2 82.1% feature · violin
Cluster 25 38 NVE13301 0.74 15.2 97.5% feature · violin
Cluster 25 39 NVE3351 0.97 15.0 97.7% feature · violin
Cluster 25 40 NVE1389 6.20 14.9 41.9% feature · violin
Cluster 25 41 NVE10899 3.34 14.8 45.9% feature · violin
Cluster 25 42 NVE25933 7.51 14.2 38.7% feature · violin
Cluster 25 43 NVE11519 5.31 14.1 42.3% feature · violin
Cluster 25 44 NVE17752 0.64 14.0 97.5% feature · violin
Cluster 25 45 NVE6784 0.75 13.9 98.7% feature · violin
Cluster 25 46 NVE17574 1.46 13.9 82.1% feature · violin
Cluster 25 47 NVE21967 0.62 13.9 99.2% feature · violin
Cluster 25 48 NVE14265 0.66 13.8 99.6% feature · violin
Cluster 25 49 NVE23244 1.27 13.6 90.1% feature · violin
Cluster 25 50 NVE4299 1.52 13.5 69.3% feature · violin
TOP