Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE17634 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 10 1 NVE16797 7.26 64.0 85.7% feature · violin
Cluster 10 2 NVE21562 4.71 59.8 85.8% feature · violin
Cluster 10 3 NVE18470 6.28 56.7 76.1% feature · violin
Cluster 10 4 NVE6615 5.02 52.9 73.6% feature · violin
Cluster 10 5 NVE23699 7.12 52.4 69.9% feature · violin
Cluster 10 6 NVE3706 6.36 48.4 64.5% feature · violin
Cluster 10 7 NVE25581 4.65 44.5 65.9% feature · violin
Cluster 10 8 NVE12489 6.29 44.1 58.6% feature · violin
Cluster 10 9 NVE13575 5.86 43.5 58.4% feature · violin
Cluster 10 10 NVE25366 3.55 43.0 66.3% feature · violin
Cluster 10 11 NVE9921 5.22 41.1 56.1% feature · violin
Cluster 10 12 NVE16798 3.32 39.4 61.8% feature · violin
Cluster 10 13 NVE15194 1.86 39.0 96.5% feature · violin
Cluster 10 14 NVE19849 2.61 38.1 68.9% feature · violin
Cluster 10 15 NVE14422 5.65 37.9 50.9% feature · violin
Cluster 10 16 NVE16594 5.84 37.8 50.6% feature · violin
Cluster 10 17 NVE1396 4.10 37.7 55.3% feature · violin
Cluster 10 18 NVE16599 3.89 37.6 55.3% feature · violin
Cluster 10 19 NVE16799 5.21 37.5 51.2% feature · violin
Cluster 10 20 NVE25580 3.70 37.1 59.4% feature · violin
Cluster 10 21 NVE16598 5.03 36.7 50.0% feature · violin
Cluster 10 22 NVE4706 5.22 36.3 49.3% feature · violin
Cluster 10 23 NVE23700 6.15 35.8 47.5% feature · violin
Cluster 10 24 NVE6211 4.81 34.8 48.0% feature · violin
Cluster 10 25 NVE17634 6.80 34.6 45.8% feature · violin
Cluster 10 26 NVE5216 2.60 34.0 62.9% feature · violin
Cluster 10 27 NVE5223 3.14 33.7 63.1% feature · violin
Cluster 10 28 NVE21285 3.11 33.1 51.8% feature · violin
Cluster 10 29 NVE15668 1.17 32.4 95.4% feature · violin
Cluster 10 30 NVE1395 4.09 32.3 46.1% feature · violin
Cluster 10 31 NVE21851 2.07 31.6 70.8% feature · violin
Cluster 10 32 NVE3871 4.27 31.3 44.1% feature · violin
Cluster 10 33 NVE23956 2.82 31.3 54.1% feature · violin
Cluster 10 34 NVE13992 1.45 30.4 81.9% feature · violin
Cluster 10 35 NVE21004 1.82 30.1 69.4% feature · violin
Cluster 10 36 NVE4741 2.27 30.1 57.2% feature · violin
Cluster 10 37 NVE19202 2.70 30.0 50.0% feature · violin
Cluster 10 38 NVE18469 2.91 29.7 47.9% feature · violin
Cluster 10 39 NVE366 2.47 29.6 56.3% feature · violin
Cluster 10 40 NVE23746 4.17 29.5 41.7% feature · violin
Cluster 10 41 NVE9490 2.03 29.4 77.5% feature · violin
Cluster 10 42 NVE17278 6.43 29.2 38.5% feature · violin
Cluster 10 43 NVE14419 2.24 28.8 56.3% feature · violin
Cluster 10 44 NVE17635 6.40 28.8 38.2% feature · violin
Cluster 10 45 NVE5418 1.77 28.7 75.6% feature · violin
Cluster 10 46 NVE10060 2.09 28.6 59.6% feature · violin
Cluster 10 47 NVE11962 1.86 28.5 65.7% feature · violin
Cluster 10 48 NVE3064 1.83 28.5 64.7% feature · violin
Cluster 10 49 NVE6616 5.65 28.3 37.7% feature · violin
Cluster 10 50 NVE18293 2.23 28.2 54.6% feature · violin
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