Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE1907 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 13 1 NVE6677 5.52 68.3 82.8% feature · violin
Cluster 13 2 NVE23972 4.02 55.4 73.0% feature · violin
Cluster 13 3 NVE23271 3.65 53.9 72.5% feature · violin
Cluster 13 4 NVE24203 5.27 46.1 55.2% feature · violin
Cluster 13 5 NVE1907 2.14 46.0 94.3% feature · violin
Cluster 13 6 NVE429 5.45 42.8 50.5% feature · violin
Cluster 13 7 NVE6335 2.26 40.5 67.9% feature · violin
Cluster 13 8 NVE15559 4.42 35.6 43.8% feature · violin
Cluster 13 9 NVE7318 2.83 34.6 53.2% feature · violin
Cluster 13 10 NVE23143 0.95 34.5 98.9% feature · violin
Cluster 13 11 NVE8064 4.72 34.4 43.0% feature · violin
Cluster 13 12 NVE7996 1.40 33.9 82.2% feature · violin
Cluster 13 13 NVE8534 5.04 33.8 40.1% feature · violin
Cluster 13 14 NVE10019 1.64 33.6 80.9% feature · violin
Cluster 13 15 NVE2618 1.35 33.5 95.3% feature · violin
Cluster 13 16 NVE5662 2.63 33.0 50.7% feature · violin
Cluster 13 17 NVE18721 1.88 32.7 63.3% feature · violin
Cluster 13 18 NVE4682 4.47 31.1 38.0% feature · violin
Cluster 13 19 NVE19591 1.52 30.4 68.6% feature · violin
Cluster 13 20 NVE3630 5.79 30.2 35.2% feature · violin
Cluster 13 21 NVE23819 1.31 30.0 72.2% feature · violin
Cluster 13 22 NVE12842 1.97 29.7 75.1% feature · violin
Cluster 13 23 NVE15017 2.36 29.6 48.2% feature · violin
Cluster 13 24 NVE8536 5.38 29.3 34.3% feature · violin
Cluster 13 25 NVE6228 3.23 29.0 39.3% feature · violin
Cluster 13 26 NVE2476 5.08 28.6 33.9% feature · violin
Cluster 13 27 NVE230 1.21 28.0 79.2% feature · violin
Cluster 13 28 NVE10899 3.65 27.2 35.0% feature · violin
Cluster 13 29 NVE7206 2.91 26.9 38.4% feature · violin
Cluster 13 30 NVE20565 2.55 26.8 41.5% feature · violin
Cluster 13 31 NVE15969 1.62 26.7 63.4% feature · violin
Cluster 13 32 NVE23640 5.83 26.5 30.7% feature · violin
Cluster 13 33 NVE16355 5.45 26.1 31.3% feature · violin
Cluster 13 34 NVE12889 3.85 26.1 32.7% feature · violin
Cluster 13 35 NVE20919 5.17 26.0 30.7% feature · violin
Cluster 13 36 NVE930 3.88 26.0 32.8% feature · violin
Cluster 13 37 NVE11988 6.36 25.8 29.7% feature · violin
Cluster 13 38 NVE9243 3.75 25.6 32.8% feature · violin
Cluster 13 39 NVE8535 4.29 25.5 31.2% feature · violin
Cluster 13 40 NVE9230 4.06 25.4 31.5% feature · violin
Cluster 13 41 NVE19147 1.79 25.3 49.2% feature · violin
Cluster 13 42 NVE12172 1.39 25.1 73.2% feature · violin
Cluster 13 43 NVE19082 2.68 25.0 36.9% feature · violin
Cluster 13 44 NVE18455 2.05 25.0 44.2% feature · violin
Cluster 13 45 NVE17084 1.32 24.9 71.1% feature · violin
Cluster 13 46 NVE24272 3.27 24.7 32.7% feature · violin
Cluster 13 47 NVE15435 1.93 24.3 58.0% feature · violin
Cluster 13 48 NVE9410 1.21 24.3 64.1% feature · violin
Cluster 13 49 NVE25571 1.51 24.1 55.7% feature · violin
Cluster 13 50 NVE7859 3.24 23.6 32.0% feature · violin
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