Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE19503 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 26 1 NVE3912 9.43 49.0 99.0% feature · violin
Cluster 26 2 NVE20160 9.45 49.0 99.0% feature · violin
Cluster 26 3 NVE2876 8.70 48.7 99.0% feature · violin
Cluster 26 4 NVE1725 9.01 47.9 97.0% feature · violin
Cluster 26 5 NVE6666 5.06 46.3 97.7% feature · violin
Cluster 26 6 NVE19155 8.18 45.1 91.7% feature · violin
Cluster 26 7 NVE17049 9.18 43.8 88.7% feature · violin
Cluster 26 8 NVE14552 5.98 43.8 92.4% feature · violin
Cluster 26 9 NVE4315 3.88 43.5 96.8% feature · violin
Cluster 26 10 NVE1642 6.12 42.1 87.5% feature · violin
Cluster 26 11 NVE21834 9.79 41.7 84.4% feature · violin
Cluster 26 12 NVE2557 6.78 41.4 85.4% feature · violin
Cluster 26 13 NVE7822 9.61 40.6 82.2% feature · violin
Cluster 26 14 NVE13457 5.54 39.0 83.2% feature · violin
Cluster 26 15 NVE19503 4.59 38.6 84.0% feature · violin
Cluster 26 16 NVE23813 2.20 33.5 98.6% feature · violin
Cluster 26 17 NVE3445 2.72 33.0 90.0% feature · violin
Cluster 26 18 NVE24488 4.92 32.7 71.8% feature · violin
Cluster 26 19 NVE12038 7.95 32.3 65.8% feature · violin
Cluster 26 20 NVE16356 7.30 30.8 63.0% feature · violin
Cluster 26 21 NVE2822 1.71 30.6 95.8% feature · violin
Cluster 26 22 NVE1757 4.24 30.2 69.3% feature · violin
Cluster 26 23 NVE7446 2.92 30.0 84.6% feature · violin
Cluster 26 24 NVE12992 4.44 29.5 67.2% feature · violin
Cluster 26 25 NVE2120 4.21 29.1 65.8% feature · violin
Cluster 26 26 NVE478 5.59 28.3 59.9% feature · violin
Cluster 26 27 NVE12039 0.89 27.4 99.3% feature · violin
Cluster 26 28 NVE8007 5.41 27.1 57.3% feature · violin
Cluster 26 29 NVE477 4.22 26.4 60.0% feature · violin
Cluster 26 30 NVE19102 2.77 26.4 71.8% feature · violin
Cluster 26 31 NVE23181 2.31 26.3 91.7% feature · violin
Cluster 26 32 NVE10788 3.75 26.0 61.0% feature · violin
Cluster 26 33 NVE8429 1.00 25.7 99.0% feature · violin
Cluster 26 34 NVE16502 2.14 25.2 82.8% feature · violin
Cluster 26 35 NVE24738 2.58 25.0 89.7% feature · violin
Cluster 26 36 NVE23818 1.73 24.8 90.8% feature · violin
Cluster 26 37 NVE19184 2.26 24.6 78.8% feature · violin
Cluster 26 38 NVE22273 4.64 24.0 52.2% feature · violin
Cluster 26 39 NVE10147 3.49 23.7 57.4% feature · violin
Cluster 26 40 NVE18711 1.09 23.5 96.3% feature · violin
Cluster 26 41 NVE10719 5.85 23.3 49.3% feature · violin
Cluster 26 42 NVE6160 3.36 23.0 56.3% feature · violin
Cluster 26 43 NVE16297 2.21 22.8 83.2% feature · violin
Cluster 26 44 NVE25082 1.81 22.8 85.0% feature · violin
Cluster 26 45 NVE18163 2.87 22.2 58.2% feature · violin
Cluster 26 46 NVE1907 1.76 22.1 92.1% feature · violin
Cluster 26 47 NVE4206 4.06 22.1 49.7% feature · violin
Cluster 26 48 NVE5716 2.63 22.1 62.2% feature · violin
Cluster 26 49 NVE10562 3.12 21.7 53.8% feature · violin
Cluster 26 50 NVE19721 8.17 21.0 42.7% feature · violin
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