Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE20609 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 16 1 NVE8163 10.52 59.8 97.5% feature · violin
Cluster 16 2 NVE14917 9.99 56.9 93.0% feature · violin
Cluster 16 3 NVE5901 9.99 56.5 92.1% feature · violin
Cluster 16 4 NVE25858 9.87 56.5 92.1% feature · violin
Cluster 16 5 NVE16867 9.65 51.9 84.8% feature · violin
Cluster 16 6 NVE2435 5.29 48.3 83.3% feature · violin
Cluster 16 7 NVE23913 9.40 43.0 70.3% feature · violin
Cluster 16 8 NVE6677 4.54 42.9 79.5% feature · violin
Cluster 16 9 NVE11879 8.55 42.4 69.4% feature · violin
Cluster 16 10 NVE2906 9.37 40.9 66.7% feature · violin
Cluster 16 11 NVE20798 9.38 40.2 65.5% feature · violin
Cluster 16 12 NVE21972 2.47 39.3 90.1% feature · violin
Cluster 16 13 NVE23327 5.98 36.0 62.6% feature · violin
Cluster 16 14 NVE21713 6.25 35.9 61.4% feature · violin
Cluster 16 15 NVE1227 4.20 35.3 64.2% feature · violin
Cluster 16 16 NVE10806 5.77 34.2 57.5% feature · violin
Cluster 16 17 NVE7805 7.10 33.9 55.8% feature · violin
Cluster 16 18 NVE4175 8.60 33.5 54.7% feature · violin
Cluster 16 19 NVE8404 8.20 32.3 52.7% feature · violin
Cluster 16 20 NVE16604 1.80 32.0 86.1% feature · violin
Cluster 16 21 NVE3852 5.22 32.0 54.9% feature · violin
Cluster 16 22 NVE4418 8.39 31.5 51.3% feature · violin
Cluster 16 23 NVE14800 1.69 31.4 91.1% feature · violin
Cluster 16 24 NVE19339 3.47 30.3 58.4% feature · violin
Cluster 16 25 NVE16872 9.57 30.0 48.9% feature · violin
Cluster 16 26 NVE23932 6.91 30.0 49.9% feature · violin
Cluster 16 27 NVE22528 3.14 29.7 60.0% feature · violin
Cluster 16 28 NVE21881 4.16 29.6 55.1% feature · violin
Cluster 16 29 NVE20452 2.63 29.3 65.9% feature · violin
Cluster 16 30 NVE12138 3.98 29.3 53.7% feature · violin
Cluster 16 31 NVE4616 7.67 29.2 47.7% feature · violin
Cluster 16 32 NVE8767 1.59 28.7 88.5% feature · violin
Cluster 16 33 NVE25497 6.15 28.6 47.6% feature · violin
Cluster 16 34 NVE2222 8.19 28.1 46.0% feature · violin
Cluster 16 35 NVE23972 2.85 28.0 61.4% feature · violin
Cluster 16 36 NVE9110 3.75 27.7 51.1% feature · violin
Cluster 16 37 NVE10151 0.82 27.5 98.6% feature · violin
Cluster 16 38 NVE3061 1.81 26.5 78.0% feature · violin
Cluster 16 39 NVE11295 5.49 26.5 44.8% feature · violin
Cluster 16 40 NVE17226 1.58 25.7 79.5% feature · violin
Cluster 16 41 NVE12945 4.20 25.6 46.1% feature · violin
Cluster 16 42 NVE24125 2.71 25.5 54.9% feature · violin
Cluster 16 43 NVE26192 2.02 25.3 71.5% feature · violin
Cluster 16 44 NVE20609 2.24 24.9 61.0% feature · violin
Cluster 16 45 NVE18910 6.18 24.9 41.4% feature · violin
Cluster 16 46 NVE5222 4.89 24.9 42.9% feature · violin
Cluster 16 47 NVE3445 1.67 24.8 77.5% feature · violin
Cluster 16 48 NVE20152 9.49 24.8 40.3% feature · violin
Cluster 16 49 NVE4617 3.22 24.8 49.6% feature · violin
Cluster 16 50 NVE16339 3.40 24.5 47.8% feature · violin
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