Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE21527 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 20 1 NVE6677 4.14 27.2 74.8% feature · violin
Cluster 20 2 NVE4602 7.68 27.1 64.7% feature · violin
Cluster 20 3 NVE23271 2.70 20.4 65.5% feature · violin
Cluster 20 4 NVE7996 1.68 19.7 87.2% feature · violin
Cluster 20 5 NVE10853 3.21 18.7 54.2% feature · violin
Cluster 20 6 NVE5882 8.53 18.2 42.6% feature · violin
Cluster 20 7 NVE3463 2.03 17.9 67.5% feature · violin
Cluster 20 8 NVE23143 0.96 17.6 98.4% feature · violin
Cluster 20 9 NVE23805 9.41 17.4 40.7% feature · violin
Cluster 20 10 NVE5662 2.65 17.3 55.1% feature · violin
Cluster 20 11 NVE6868 3.81 16.9 44.4% feature · violin
Cluster 20 12 NVE23327 4.86 16.5 44.7% feature · violin
Cluster 20 13 NVE2234 4.18 16.4 41.8% feature · violin
Cluster 20 14 NVE1907 1.47 15.9 90.5% feature · violin
Cluster 20 15 NVE7206 3.12 15.4 44.6% feature · violin
Cluster 20 16 NVE20565 2.54 15.2 48.4% feature · violin
Cluster 20 17 NVE6228 2.96 14.3 41.2% feature · violin
Cluster 20 18 NVE1796 7.57 14.1 33.2% feature · violin
Cluster 20 19 NVE20522 6.63 13.9 33.3% feature · violin
Cluster 20 20 NVE3143 0.98 13.8 90.2% feature · violin
Cluster 20 21 NVE17839 3.95 13.8 35.9% feature · violin
Cluster 20 22 NVE4605 5.59 13.7 34.0% feature · violin
Cluster 20 23 NVE13315 1.04 13.7 81.4% feature · violin
Cluster 20 24 NVE13599 3.84 13.5 36.2% feature · violin
Cluster 20 25 NVE5418 1.51 12.9 68.9% feature · violin
Cluster 20 26 NVE16374 7.23 12.9 30.3% feature · violin
Cluster 20 27 NVE23972 1.95 12.8 48.1% feature · violin
Cluster 20 28 NVE13346 0.75 12.8 98.9% feature · violin
Cluster 20 29 NVE17574 1.18 12.7 74.7% feature · violin
Cluster 20 30 NVE23145 1.52 12.5 86.9% feature · violin
Cluster 20 31 NVE20085 6.95 12.4 29.5% feature · violin
Cluster 20 32 NVE17678 4.51 12.2 30.4% feature · violin
Cluster 20 33 NVE2965 8.27 12.1 28.7% feature · violin
Cluster 20 34 NVE22002 7.36 12.1 28.7% feature · violin
Cluster 20 35 NVE23569 3.30 12.1 34.9% feature · violin
Cluster 20 36 NVE4525 4.48 12.0 33.0% feature · violin
Cluster 20 37 NVE12909 0.94 12.0 79.6% feature · violin
Cluster 20 38 NVE25759 7.08 12.0 28.4% feature · violin
Cluster 20 39 NVE15510 6.52 11.9 28.4% feature · violin
Cluster 20 40 NVE21527 7.92 11.8 28.0% feature · violin
Cluster 20 41 NVE15186 8.34 11.6 27.2% feature · violin
Cluster 20 42 NVE23844 1.97 11.5 42.1% feature · violin
Cluster 20 43 NVE11299 3.51 11.4 30.1% feature · violin
Cluster 20 44 NVE2618 0.92 11.4 93.8% feature · violin
Cluster 20 45 NVE6749 5.63 11.4 27.6% feature · violin
Cluster 20 46 NVE22589 9.48 11.3 26.4% feature · violin
Cluster 20 47 NVE22590 8.66 11.3 26.4% feature · violin
Cluster 20 48 NVE16297 1.29 11.1 72.0% feature · violin
Cluster 20 49 NVE9443 1.26 11.1 56.6% feature · violin
Cluster 20 50 NVE12877 7.53 10.9 26.0% feature · violin
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