Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE25645 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 21 1 NVE24203 6.06 19.2 83.0% feature · violin
Cluster 21 2 NVE10899 6.66 18.8 79.5% feature · violin
Cluster 21 3 NVE14933 5.93 17.9 76.5% feature · violin
Cluster 21 4 NVE2876 4.15 17.5 88.0% feature · violin
Cluster 21 5 NVE13278 4.50 14.8 67.5% feature · violin
Cluster 21 6 NVE226 8.46 14.6 60.5% feature · violin
Cluster 21 7 NVE8332 7.83 13.5 56.0% feature · violin
Cluster 21 8 NVE5400 2.02 13.4 90.0% feature · violin
Cluster 21 9 NVE8199 4.55 13.4 60.5% feature · violin
Cluster 21 10 NVE9787 2.68 13.3 98.5% feature · violin
Cluster 21 11 NVE7860 5.32 13.0 56.0% feature · violin
Cluster 21 12 NVE9425 7.90 12.9 53.5% feature · violin
Cluster 21 13 NVE8066 6.30 12.6 53.5% feature · violin
Cluster 21 14 NVE8130 8.08 12.2 50.5% feature · violin
Cluster 21 15 NVE8429 0.87 11.8 98.0% feature · violin
Cluster 21 16 NVE17327 7.64 11.6 48.0% feature · violin
Cluster 21 17 NVE25571 2.53 11.5 70.5% feature · violin
Cluster 21 18 NVE25207 6.58 11.2 46.5% feature · violin
Cluster 21 19 NVE2514 4.69 10.7 47.0% feature · violin
Cluster 21 20 NVE2897 4.46 10.7 47.5% feature · violin
Cluster 21 21 NVE10788 3.27 10.6 53.0% feature · violin
Cluster 21 22 NVE4682 4.24 10.5 47.5% feature · violin
Cluster 21 23 NVE6335 2.02 10.5 69.0% feature · violin
Cluster 21 24 NVE24488 3.79 10.4 49.5% feature · violin
Cluster 21 25 NVE3894 3.03 10.0 51.0% feature · violin
Cluster 21 26 NVE23271 2.25 9.9 61.0% feature · violin
Cluster 21 27 NVE11166 2.53 9.8 56.0% feature · violin
Cluster 21 28 NVE2833 5.61 9.8 41.5% feature · violin
Cluster 21 29 NVE429 3.77 9.8 45.0% feature · violin
Cluster 21 30 NVE9571 2.85 9.7 51.5% feature · violin
Cluster 21 31 NVE25645 8.98 9.6 39.5% feature · violin
Cluster 21 32 NVE691 4.75 9.6 42.0% feature · violin
Cluster 21 33 NVE18938 8.28 9.6 39.5% feature · violin
Cluster 21 34 NVE24995 6.25 9.3 39.0% feature · violin
Cluster 21 35 NVE15894 2.11 9.3 60.0% feature · violin
Cluster 21 36 NVE8149 4.75 9.2 40.0% feature · violin
Cluster 21 37 NVE23813 1.28 9.2 93.5% feature · violin
Cluster 21 38 NVE3445 1.56 9.2 76.5% feature · violin
Cluster 21 39 NVE814 3.10 9.1 46.5% feature · violin
Cluster 21 40 NVE23181 1.69 9.0 85.0% feature · violin
Cluster 21 41 NVE8165 8.25 9.0 37.0% feature · violin
Cluster 21 42 NVE3723 10.50 8.9 36.5% feature · violin
Cluster 21 43 NVE7359 2.66 8.9 49.0% feature · violin
Cluster 21 44 NVE6457 4.45 8.8 39.0% feature · violin
Cluster 21 45 NVE266 3.22 8.8 43.0% feature · violin
Cluster 21 46 NVE8534 3.73 8.7 40.0% feature · violin
Cluster 21 47 NVE11067 2.69 8.7 47.5% feature · violin
Cluster 21 48 NVE20412 1.29 8.7 86.0% feature · violin
Cluster 21 49 NVE20089 1.46 8.6 74.0% feature · violin
Cluster 21 50 NVE19143 7.69 8.6 35.5% feature · violin
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