Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE2814 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 19 1 NVE9787 2.99 14.5 99.0% feature · violin
Cluster 19 2 NVE2876 3.66 14.4 81.2% feature · violin
Cluster 19 3 NVE2187 11.93 13.6 57.1% feature · violin
Cluster 19 4 NVE23561 5.44 13.4 59.7% feature · violin
Cluster 19 5 NVE2189 12.03 12.9 53.9% feature · violin
Cluster 19 6 NVE4486 11.46 12.7 53.4% feature · violin
Cluster 19 7 NVE23143 1.34 12.7 99.0% feature · violin
Cluster 19 8 NVE21647 10.34 12.5 52.4% feature · violin
Cluster 19 9 NVE21761 7.15 12.2 51.8% feature · violin
Cluster 19 10 NVE4901 11.22 12.1 50.8% feature · violin
Cluster 19 11 NVE18269 8.61 11.9 50.8% feature · violin
Cluster 19 12 NVE17090 11.61 11.7 49.2% feature · violin
Cluster 19 13 NVE814 4.32 10.9 52.4% feature · violin
Cluster 19 14 NVE3143 1.37 10.8 86.4% feature · violin
Cluster 19 15 NVE14556 10.87 10.7 45.0% feature · violin
Cluster 19 16 NVE18268 8.83 10.6 45.0% feature · violin
Cluster 19 17 NVE2188 11.65 10.4 43.5% feature · violin
Cluster 19 18 NVE2814 9.32 10.2 42.9% feature · violin
Cluster 19 19 NVE18733 5.94 10.1 44.0% feature · violin
Cluster 19 20 NVE13758 3.99 9.9 55.0% feature · violin
Cluster 19 21 NVE4897 11.44 9.7 40.8% feature · violin
Cluster 19 22 NVE13110 4.41 9.7 45.5% feature · violin
Cluster 19 23 NVE17084 2.27 9.7 72.8% feature · violin
Cluster 19 24 NVE15435 2.55 9.7 70.7% feature · violin
Cluster 19 25 NVE23049 11.39 9.6 40.3% feature · violin
Cluster 19 26 NVE20235 3.59 9.4 51.3% feature · violin
Cluster 19 27 NVE12842 2.14 9.3 83.8% feature · violin
Cluster 19 28 NVE14517 7.64 9.3 39.3% feature · violin
Cluster 19 29 NVE15943 2.14 9.1 91.1% feature · violin
Cluster 19 30 NVE14660 10.44 9.0 37.7% feature · violin
Cluster 19 31 NVE17939 1.70 8.7 72.8% feature · violin
Cluster 19 32 NVE12172 1.72 8.5 74.9% feature · violin
Cluster 19 33 NVE25547 4.72 8.5 38.7% feature · violin
Cluster 19 34 NVE23459 7.00 8.5 36.6% feature · violin
Cluster 19 35 NVE10958 8.33 8.4 35.6% feature · violin
Cluster 19 36 NVE2375 7.99 8.4 35.6% feature · violin
Cluster 19 37 NVE18688 5.29 8.3 37.2% feature · violin
Cluster 19 38 NVE13659 10.86 8.2 34.6% feature · violin
Cluster 19 39 NVE10283 2.28 8.2 61.3% feature · violin
Cluster 19 40 NVE3919 2.39 8.1 55.0% feature · violin
Cluster 19 41 NVE1122 8.07 8.0 34.0% feature · violin
Cluster 19 42 NVE7846 2.16 8.0 53.4% feature · violin
Cluster 19 43 NVE6010 2.19 7.9 61.8% feature · violin
Cluster 19 44 NVE2668 3.92 7.8 37.2% feature · violin
Cluster 19 45 NVE2237 3.62 7.7 37.7% feature · violin
Cluster 19 46 NVE3918 1.79 7.7 71.7% feature · violin
Cluster 19 47 NVE20421 2.73 7.7 46.6% feature · violin
Cluster 19 48 NVE14800 1.08 7.7 74.3% feature · violin
Cluster 19 49 NVE4899 9.06 7.6 31.9% feature · violin
Cluster 19 50 NVE1076 0.70 7.4 89.5% feature · violin
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