Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE5009 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 23 1 NVE23392 7.51 30.5 71.1% feature · violin
Cluster 23 2 NVE5857 7.61 28.8 68.0% feature · violin
Cluster 23 3 NVE15608 8.61 25.4 58.8% feature · violin
Cluster 23 4 NVE20732 7.00 23.9 55.9% feature · violin
Cluster 23 5 NVE1216 9.13 23.1 53.2% feature · violin
Cluster 23 6 NVE20630 3.23 22.8 67.6% feature · violin
Cluster 23 7 NVE17138 9.33 20.8 47.9% feature · violin
Cluster 23 8 NVE9331 2.01 20.6 78.6% feature · violin
Cluster 23 9 NVE6228 3.73 20.6 54.4% feature · violin
Cluster 23 10 NVE4299 1.97 20.6 76.4% feature · violin
Cluster 23 11 NVE23993 0.80 19.7 99.5% feature · violin
Cluster 23 12 NVE5009 2.10 19.5 73.8% feature · violin
Cluster 23 13 NVE6110 8.31 19.4 44.9% feature · violin
Cluster 23 14 NVE9443 2.07 19.1 67.9% feature · violin
Cluster 23 15 NVE21104 4.77 18.8 48.8% feature · violin
Cluster 23 16 NVE8767 1.41 18.6 87.5% feature · violin
Cluster 23 17 NVE16580 5.98 18.3 44.3% feature · violin
Cluster 23 18 NVE13106 7.41 18.3 42.9% feature · violin
Cluster 23 19 NVE10151 0.71 18.1 97.7% feature · violin
Cluster 23 20 NVE2822 1.07 17.6 89.7% feature · violin
Cluster 23 21 NVE20452 2.07 16.9 60.8% feature · violin
Cluster 23 22 NVE23274 7.49 16.8 39.3% feature · violin
Cluster 23 23 NVE14800 1.27 16.6 85.3% feature · violin
Cluster 23 24 NVE13189 5.68 16.3 38.4% feature · violin
Cluster 23 25 NVE1743 2.65 15.8 48.0% feature · violin
Cluster 23 26 NVE9787 2.01 15.8 97.5% feature · violin
Cluster 23 27 NVE23972 2.19 15.8 54.8% feature · violin
Cluster 23 28 NVE3143 1.06 15.7 89.1% feature · violin
Cluster 23 29 NVE23810 7.18 15.6 36.8% feature · violin
Cluster 23 30 NVE69 0.81 15.4 97.7% feature · violin
Cluster 23 31 NVE16618 6.56 15.3 35.7% feature · violin
Cluster 23 32 NVE17226 1.35 15.3 73.9% feature · violin
Cluster 23 33 NVE26198 2.54 15.2 47.3% feature · violin
Cluster 23 34 NVE12909 1.14 15.1 83.2% feature · violin
Cluster 23 35 NVE25369 0.71 15.0 99.2% feature · violin
Cluster 23 36 NVE4021 0.55 14.8 99.5% feature · violin
Cluster 23 37 NVE4703 0.90 14.5 86.4% feature · violin
Cluster 23 38 NVE13069 6.44 14.4 33.7% feature · violin
Cluster 23 39 NVE10602 0.62 14.3 98.6% feature · violin
Cluster 23 40 NVE19531 2.18 14.0 49.3% feature · violin
Cluster 23 41 NVE379 0.72 13.8 97.3% feature · violin
Cluster 23 42 NVE16548 8.02 13.7 31.7% feature · violin
Cluster 23 43 NVE4890 0.51 13.7 98.6% feature · violin
Cluster 23 44 NVE3705 1.62 13.7 59.1% feature · violin
Cluster 23 45 NVE11676 1.14 13.3 74.3% feature · violin
Cluster 23 46 NVE21507 0.48 13.2 98.4% feature · violin
Cluster 23 47 NVE7504 7.58 13.0 30.1% feature · violin
Cluster 23 48 NVE3754 2.48 12.9 39.3% feature · violin
Cluster 23 49 NVE9071 6.70 12.7 30.1% feature · violin
Cluster 23 50 NVE19369 1.56 12.7 55.7% feature · violin
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