Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Cluster 36477 Cluster 94851 Cluster 113969 Cluster 173507 Cluster 42947 Cluster 132768 Cluster 02704 Cluster 52280 Cluster 12197 Cluster 102076 Cluster 151890 Cluster 21591 Cluster 61575 Cluster 81502 Cluster 161299 Cluster 221091 Cluster 12986 Cluster 18836 Cluster 26833 Cluster 14644 Cluster 23641 Cluster 20624 Cluster 7577 Cluster 25475 Cluster 24435 Cluster 21200 Cluster 19191
This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that NVE910 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 18 1 NVE908 5.84 39.1 83.0% feature · violin
Cluster 18 2 NVE910 7.31 37.7 77.2% feature · violin
Cluster 18 3 NVE16306 4.31 35.5 82.7% feature · violin
Cluster 18 4 NVE25082 2.89 35.4 92.3% feature · violin
Cluster 18 5 NVE9434 6.38 35.3 73.4% feature · violin
Cluster 18 6 NVE6021 4.29 35.0 82.1% feature · violin
Cluster 18 7 NVE25792 3.37 34.4 89.8% feature · violin
Cluster 18 8 NVE11079 3.55 32.9 80.9% feature · violin
Cluster 18 9 NVE13456 2.87 32.6 88.6% feature · violin
Cluster 18 10 NVE22972 4.34 31.0 71.1% feature · violin
Cluster 18 11 NVE6022 4.25 30.7 71.1% feature · violin
Cluster 18 12 NVE18855 3.96 30.6 71.7% feature · violin
Cluster 18 13 NVE22400 2.76 30.3 81.7% feature · violin
Cluster 18 14 NVE10817 4.36 30.3 70.5% feature · violin
Cluster 18 15 NVE726 3.43 29.9 74.8% feature · violin
Cluster 18 16 NVE19323 4.28 29.4 66.5% feature · violin
Cluster 18 17 NVE20337 3.67 29.1 70.5% feature · violin
Cluster 18 18 NVE16683 7.81 28.4 57.9% feature · violin
Cluster 18 19 NVE16307 2.68 27.5 76.0% feature · violin
Cluster 18 20 NVE13354 3.86 26.8 61.8% feature · violin
Cluster 18 21 NVE6010 2.79 26.7 87.1% feature · violin
Cluster 18 22 NVE6308 3.58 26.6 63.2% feature · violin
Cluster 18 23 NVE13150 4.80 26.6 57.7% feature · violin
Cluster 18 24 NVE11258 3.17 25.4 64.6% feature · violin
Cluster 18 25 NVE318 4.12 25.1 56.9% feature · violin
Cluster 18 26 NVE21203 2.26 24.8 78.6% feature · violin
Cluster 18 27 NVE909 7.19 24.7 50.5% feature · violin
Cluster 18 28 NVE11364 3.77 24.6 57.1% feature · violin
Cluster 18 29 NVE5299 3.62 24.6 57.7% feature · violin
Cluster 18 30 NVE10140 2.64 24.1 69.9% feature · violin
Cluster 18 31 NVE14871 2.15 23.8 81.3% feature · violin
Cluster 18 32 NVE7496 2.18 23.7 78.8% feature · violin
Cluster 18 33 NVE7254 6.81 23.4 48.0% feature · violin
Cluster 18 34 NVE17645 3.05 23.1 59.1% feature · violin
Cluster 18 35 NVE18762 3.28 22.9 56.0% feature · violin
Cluster 18 36 NVE10463 2.47 22.7 65.4% feature · violin
Cluster 18 37 NVE10816 2.04 22.6 75.4% feature · violin
Cluster 18 38 NVE14037 2.96 22.6 58.6% feature · violin
Cluster 18 39 NVE9010 3.80 22.4 52.4% feature · violin
Cluster 18 40 NVE12051 0.58 22.2 99.9% feature · violin
Cluster 18 41 NVE20336 3.15 21.6 53.8% feature · violin
Cluster 18 42 NVE10189 0.94 21.4 97.8% feature · violin
Cluster 18 43 NVE4998 2.19 21.2 66.5% feature · violin
Cluster 18 44 NVE4331 2.74 21.2 57.2% feature · violin
Cluster 18 45 NVE25987 2.09 21.1 67.2% feature · violin
Cluster 18 46 NVE15894 2.28 20.4 61.5% feature · violin
Cluster 18 47 NVE24920 3.55 20.4 47.7% feature · violin
Cluster 18 48 NVE13969 2.51 20.4 56.7% feature · violin
Cluster 18 49 NVE23474 3.08 20.3 50.7% feature · violin
Cluster 18 50 NVE13841 2.73 20.0 53.1% feature · violin
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