Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Ectoderm25986 Secretory Progenitor2713 Endoderm2055 Unannotated1542 Mesoderm1489 Cnidocytes1471 Neuronal730 Gland Cells564

Showing the cell type that EHBP1-like-1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Unannotated 1 NV2.3010 not mapped 4.12 54.2 95.3% feature · violin
Unannotated 2 NV2.3269 not mapped 4.60 53.1 88.9% feature · violin
Unannotated 3 NV2.9829 not mapped 4.34 52.7 96.8% feature · violin
Unannotated 4 ACAP2-like-1 not mapped 3.79 51.2 91.1% feature · violin
Unannotated 5 Actin6 not mapped 2.40 50.6 99.5% feature · violin
Unannotated 6 VKT4-like-1 not mapped 2.90 50.5 95.1% feature · violin
Unannotated 7 XP_032237421.2 (NV2.3918) 4.32 50.2 84.0% feature · violin
Unannotated 8 FGF8A not mapped 3.85 50.0 88.5% feature · violin
Unannotated 9 ACTC-like-6 not mapped 2.31 49.6 99.8% feature · violin
Unannotated 10 WLS-like-1 not mapped 3.13 48.3 88.8% feature · violin
Unannotated 11 FGFa1 not mapped 3.75 47.7 88.5% feature · violin
Unannotated 12 VENT1-like-1 not mapped 2.64 47.6 96.6% feature · violin
Unannotated 13 HMCN2-like-8 not mapped 3.79 47.0 81.7% feature · violin
Unannotated 14 FOSX-like-4 not mapped 3.87 45.4 78.1% feature · violin
Unannotated 15 ACTB-like-4 not mapped 1.99 45.3 99.2% feature · violin
Unannotated 16 XP_032234122.1 (NV2.16696) 2.95 45.0 83.2% feature · violin
Unannotated 17 alphaintegrin6 not mapped 2.49 44.7 88.8% feature · violin
Unannotated 18 NV2.9905 not mapped 3.64 44.3 80.7% feature · violin
Unannotated 19 SBSPO-like-1 not mapped 4.29 44.3 75.7% feature · violin
Unannotated 20 BTG1-like-1 not mapped 2.51 43.8 92.9% feature · violin
Unannotated 21 CRAM-like-2 not mapped 3.05 42.2 79.8% feature · violin
Unannotated 22 CASP3-like-1 not mapped 2.33 41.9 90.8% feature · violin
Unannotated 23 RHO-like-1 not mapped 1.17 41.7 99.9% feature · violin
Unannotated 24 DJC21-like-1 not mapped 2.55 41.6 85.6% feature · violin
Unannotated 25 TN13B-like-6 not mapped 2.50 41.4 91.6% feature · violin
Unannotated 26 NV2.14515 not mapped 2.25 41.2 93.6% feature · violin
Unannotated 27 NV2.15097 not mapped 4.11 41.2 75.2% feature · violin
Unannotated 28 PARVA-like-1 not mapped 2.47 40.7 82.1% feature · violin
Unannotated 29 CDR2L-like-1 not mapped 2.78 40.6 78.1% feature · violin
Unannotated 30 MLC5-like-1 not mapped 3.23 40.3 75.9% feature · violin
Unannotated 31 MMP17-like-2 not mapped 4.95 40.2 64.3% feature · violin
Unannotated 32 1433E-like-5 not mapped 1.01 40.1 99.8% feature · violin
Unannotated 33 EHBP1-like-1 not mapped 3.11 39.8 72.4% feature · violin
Unannotated 34 VGLL4-like-1 not mapped 2.14 39.1 89.8% feature · violin
Unannotated 35 NHRF1-like-1 not mapped 1.89 39.0 93.0% feature · violin
Unannotated 36 RAS1-like-1 not mapped 2.15 38.9 89.0% feature · violin
Unannotated 37 betaintegrin1 not mapped 3.37 38.0 66.5% feature · violin
Unannotated 38 CYP5F-like-1 not mapped 2.30 38.0 85.0% feature · violin
Unannotated 39 RAB35-like-1 not mapped 1.78 37.6 91.6% feature · violin
Unannotated 40 FP-like-2 not mapped 2.25 37.5 81.1% feature · violin
Unannotated 41 ML12B-like-1 not mapped 1.02 37.2 99.2% feature · violin
Unannotated 42 S2544-like-3 not mapped 2.34 36.3 75.7% feature · violin
Unannotated 43 NV2.3159 not mapped 4.27 36.3 60.7% feature · violin
Unannotated 44 Wnt4 not mapped 3.25 36.3 68.7% feature · violin
Unannotated 45 XP_001623107.3 (NV2.14263) 1.63 36.2 92.7% feature · violin
Unannotated 46 LARP6-like-1 not mapped 1.91 36.2 90.7% feature · violin
Unannotated 47 THIO-like-1 not mapped 2.48 36.1 72.2% feature · violin
Unannotated 48 XP_032234303.1 (NV2.22712) 2.64 36.1 72.3% feature · violin
Unannotated 49 ADK-like-1 not mapped 1.20 35.6 96.8% feature · violin
Unannotated 50 NV2.8830 not mapped 2.99 35.5 68.8% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 46 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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