Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Ectoderm25986 Secretory Progenitor2713 Endoderm2055 Unannotated1542 Mesoderm1489 Cnidocytes1471 Neuronal730 Gland Cells564

Showing the cell type that KAPC1-like-1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Neuronal 1 CD151-like-2 not mapped 6.84 40.4 89.3% feature · violin
Neuronal 2 THIO-like-1 not mapped 6.05 40.3 91.1% feature · violin
Neuronal 3 KAPR-like-14 not mapped 5.17 40.3 91.0% feature · violin
Neuronal 4 GBGE-like-1 not mapped 5.90 38.9 87.5% feature · violin
Neuronal 5 SEGN-like-1 not mapped 7.96 38.6 84.0% feature · violin
Neuronal 6 AshA not mapped 8.03 35.7 77.8% feature · violin
Neuronal 7 P5I11-like-1 not mapped 3.58 31.6 78.4% feature · violin
Neuronal 8 SH3G3-like-3 not mapped 7.80 31.0 67.7% feature · violin
Neuronal 9 DCX-like-1 not mapped 3.46 30.5 77.3% feature · violin
Neuronal 10 NV2.13752 not mapped 10.08 30.3 65.5% feature · violin
Neuronal 11 INSM1-like-1 not mapped 4.93 30.0 70.1% feature · violin
Neuronal 12 Tpm3 not mapped 5.31 29.7 67.1% feature · violin
Neuronal 13 GLWG peptide not mapped 9.60 29.6 64.1% feature · violin
Neuronal 14 NV2.3318 not mapped 8.31 29.4 64.2% feature · violin
Neuronal 15 YPEL1-like-1 not mapped 3.43 29.2 74.5% feature · violin
Neuronal 16 CCNI-like-1 not mapped 2.13 29.1 88.1% feature · violin
Neuronal 17 NPDC1-like-1 not mapped 2.88 28.0 77.0% feature · violin
Neuronal 18 NV2.5216 not mapped 8.55 27.7 62.2% feature · violin
Neuronal 19 VSX2-like-1 not mapped 6.81 27.6 61.0% feature · violin
Neuronal 20 KAPC1-like-1 not mapped 2.13 27.2 83.0% feature · violin
Neuronal 21 MCFD2-like-2 not mapped 2.69 27.2 77.1% feature · violin
Neuronal 22 TRPV5-like-1 not mapped 3.87 26.3 63.7% feature · violin
Neuronal 23 NV2.17939 not mapped 6.74 26.3 58.5% feature · violin
Neuronal 24 TOB1-like-1 not mapped 1.99 26.3 88.2% feature · violin
Neuronal 25 NV2.7732 not mapped 6.61 26.1 57.3% feature · violin
Neuronal 26 DYT2B-like-1 not mapped 5.32 26.1 59.0% feature · violin
Neuronal 27 MTF2-like-1 not mapped 4.72 25.8 59.7% feature · violin
Neuronal 28 NCAH-like-1 not mapped 2.66 25.5 74.7% feature · violin
Neuronal 29 RAB2-like-1 not mapped 1.46 25.5 93.0% feature · violin
Neuronal 30 XP_001633384.1 (NV2.16964) 2.18 25.1 83.4% feature · violin
Neuronal 31 NV2.25322 not mapped 7.72 25.0 54.5% feature · violin
Neuronal 32 KCTD8-like-1 not mapped 6.82 24.8 54.2% feature · violin
Neuronal 33 KCNA2-like-4 not mapped 6.15 24.8 54.7% feature · violin
Neuronal 34 XP_001627278.1 (NV2.16381) 5.17 24.5 55.2% feature · violin
Neuronal 35 ABCA2-like-1 not mapped 3.83 24.2 59.2% feature · violin
Neuronal 36 KCIP2-like-1 not mapped 3.81 23.6 57.4% feature · violin
Neuronal 37 UFM1-like-1 not mapped 1.67 23.5 82.6% feature · violin
Neuronal 38 Elav1 not mapped 4.80 23.2 53.2% feature · violin
Neuronal 39 ID4-like-2 not mapped 3.70 23.0 56.3% feature · violin
Neuronal 40 NV2.13278 not mapped 1.53 22.9 85.6% feature · violin
Neuronal 41 XP_048589600.1 (NV2.3319) 8.22 22.6 49.9% feature · violin
Neuronal 42 T53I2-like-1 not mapped 2.49 22.5 65.2% feature · violin
Neuronal 43 XP_032222422.1 (NV2.11604) 1.97 22.3 74.5% feature · violin
Neuronal 44 XP_001635203.1 (NV2.18211) 3.16 22.2 57.3% feature · violin
Neuronal 45 NV2.22415 not mapped 4.33 22.1 51.5% feature · violin
Neuronal 46 KAP0-like-1 not mapped 2.30 22.0 65.9% feature · violin
Neuronal 47 CALM-like-26 not mapped 8.34 21.9 47.5% feature · violin
Neuronal 48 SYT7-like-1 not mapped 7.66 21.9 47.5% feature · violin
Neuronal 49 SH3L3-like-1 not mapped 2.12 21.8 70.1% feature · violin
Neuronal 50 KCD16-like-1 not mapped 6.54 21.8 47.9% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 45 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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