Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Ectoderm25986 Secretory Progenitor2713 Endoderm2055 Unannotated1542 Mesoderm1489 Cnidocytes1471 Neuronal730 Gland Cells564

Showing the cell type that Myc3 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Secretory Progenitor 1 NV2.13863 3.59 74.6 97.9% feature · violin
Secretory Progenitor 2 SoxC 3.96 63.1 83.3% feature · violin
Secretory Progenitor 3 NV2.16803 1.72 58.0 97.6% feature · violin
Secretory Progenitor 4 NV2.9336 3.70 52.4 69.7% feature · violin
Secretory Progenitor 5 MARH1-like-1 4.33 50.1 62.6% feature · violin
Secretory Progenitor 6 SoxB.2 3.18 43.2 60.4% feature · violin
Secretory Progenitor 7 Myc3 4.33 43.1 53.7% feature · violin
Secretory Progenitor 8 CIRBA-like-1 1.28 38.4 87.7% feature · violin
Secretory Progenitor 9 NV2.9843 1.80 38.2 73.8% feature · violin
Secretory Progenitor 10 CNTN6-like-1 4.48 37.7 46.7% feature · violin
Secretory Progenitor 11 NV2.23233 2.21 37.1 62.0% feature · violin
Secretory Progenitor 12 CDN1A-like-1 2.51 36.7 60.7% feature · violin
Secretory Progenitor 13 NV2.14259 3.80 36.2 46.6% feature · violin
Secretory Progenitor 14 Neurogenin1 6.54 35.0 41.1% feature · violin
Secretory Progenitor 15 NDKB-like-2 0.79 34.6 96.6% feature · violin
Secretory Progenitor 16 NH2L1-like-1 1.10 34.2 94.3% feature · violin
Secretory Progenitor 17 myc1 4.76 34.0 41.3% feature · violin
Secretory Progenitor 18 NV2.19104 0.57 32.8 99.6% feature · violin
Secretory Progenitor 19 FBRL-like-1 1.12 32.4 87.5% feature · violin
Secretory Progenitor 20 NV2.14132 1.02 32.2 86.0% feature · violin
Secretory Progenitor 21 DLL1-like-1 1.76 32.0 59.4% feature · violin
Secretory Progenitor 22 RS23-like-2 0.47 31.4 99.3% feature · violin
Secretory Progenitor 23 NV2.745 0.72 31.2 97.3% feature · violin
Secretory Progenitor 24 NV2.21718 2.00 31.2 55.8% feature · violin
Secretory Progenitor 25 NHP6-like-1 0.78 31.0 98.4% feature · violin
Secretory Progenitor 26 INSM1-like-1 3.53 30.7 40.2% feature · violin
Secretory Progenitor 27 PUR6-like-1 1.33 30.5 74.0% feature · violin
Secretory Progenitor 28 FKBP3-like-1 1.06 30.1 82.5% feature · violin
Secretory Progenitor 29 SUMO1-like-1 0.78 30.0 95.2% feature · violin
Secretory Progenitor 30 Prdm13 3.18 29.9 42.2% feature · violin
Secretory Progenitor 31 NV2.16964 1.34 29.9 78.0% feature · violin
Secretory Progenitor 32 AKIRB-like-1 1.07 29.5 81.5% feature · violin
Secretory Progenitor 33 SMD2-like-1 0.76 29.3 96.7% feature · violin
Secretory Progenitor 34 FBX11-like-1 3.56 28.9 37.5% feature · violin
Secretory Progenitor 35 IF5A-like-1 0.47 28.9 99.1% feature · violin
Secretory Progenitor 36 NOP10-like-1 0.97 28.0 84.3% feature · violin
Secretory Progenitor 37 MAX-like-1 0.95 28.0 81.5% feature · violin
Secretory Progenitor 38 SMD1-like-1 0.79 27.6 93.4% feature · violin
Secretory Progenitor 39 NV2.4094 1.45 27.6 59.6% feature · violin
Secretory Progenitor 40 MSIR6-like-2 0.79 27.3 91.7% feature · violin
Secretory Progenitor 41 PP12C-like-11 1.81 27.3 51.1% feature · violin
Secretory Progenitor 42 DAD1-like-1 0.65 27.3 96.2% feature · violin
Secretory Progenitor 43 LLPH-like-4 1.11 27.1 72.9% feature · violin
Secretory Progenitor 44 PA2G4-like-1 1.07 26.2 71.7% feature · violin
Secretory Progenitor 45 CYBP-like-1 1.06 26.1 69.6% feature · violin
Secretory Progenitor 46 AshB 2.78 25.8 36.7% feature · violin
Secretory Progenitor 47 RUXF-like-1 0.68 25.7 93.5% feature · violin
Secretory Progenitor 48 RS16-like-1 0.35 25.7 99.8% feature · violin
Secretory Progenitor 49 CBF5-like-1 0.95 25.4 78.7% feature · violin
Secretory Progenitor 50 RS20-like-1 0.36 25.1 99.7% feature · violin
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