Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Ectoderm25986 Secretory Progenitor2713 Endoderm2055 Unannotated1542 Mesoderm1489 Cnidocytes1471 Neuronal730 Gland Cells564

Showing the cell type that NDKB-like-2 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Secretory Progenitor 1 XP_001633864.1 (NV2.13863) 3.59 74.6 97.9% feature · violin
Secretory Progenitor 2 SoxC not mapped 3.96 63.1 83.3% feature · violin
Secretory Progenitor 3 XP_001623650.2 (NV2.16803) 1.72 58.0 97.6% feature · violin
Secretory Progenitor 4 NV2.9336 not mapped 3.70 52.4 69.7% feature · violin
Secretory Progenitor 5 MARH1-like-1 not mapped 4.33 50.1 62.6% feature · violin
Secretory Progenitor 6 SoxB.2 not mapped 3.18 43.2 60.4% feature · violin
Secretory Progenitor 7 Myc3 not mapped 4.33 43.1 53.7% feature · violin
Secretory Progenitor 8 CIRBA-like-1 not mapped 1.28 38.4 87.7% feature · violin
Secretory Progenitor 9 NV2.9843 not mapped 1.80 38.2 73.8% feature · violin
Secretory Progenitor 10 CNTN6-like-1 not mapped 4.48 37.7 46.7% feature · violin
Secretory Progenitor 11 NV2.23233 not mapped 2.21 37.1 62.0% feature · violin
Secretory Progenitor 12 CDN1A-like-1 not mapped 2.51 36.7 60.7% feature · violin
Secretory Progenitor 13 NV2.14259 not mapped 3.80 36.2 46.6% feature · violin
Secretory Progenitor 14 Neurogenin1 not mapped 6.54 35.0 41.1% feature · violin
Secretory Progenitor 15 NDKB-like-2 not mapped 0.79 34.6 96.6% feature · violin
Secretory Progenitor 16 NH2L1-like-1 not mapped 1.10 34.2 94.3% feature · violin
Secretory Progenitor 17 myc1 not mapped 4.76 34.0 41.3% feature · violin
Secretory Progenitor 18 XP_048584944.1 (NV2.19104) 0.57 32.8 99.6% feature · violin
Secretory Progenitor 19 FBRL-like-1 not mapped 1.12 32.4 87.5% feature · violin
Secretory Progenitor 20 XP_032238651.1 (NV2.14132) 1.02 32.2 86.0% feature · violin
Secretory Progenitor 21 DLL1-like-1 not mapped 1.76 32.0 59.4% feature · violin
Secretory Progenitor 22 RS23-like-2 not mapped 0.47 31.4 99.3% feature · violin
Secretory Progenitor 23 NV2.745 not mapped 0.72 31.2 97.3% feature · violin
Secretory Progenitor 24 NV2.21718 not mapped 2.00 31.2 55.8% feature · violin
Secretory Progenitor 25 NHP6-like-1 not mapped 0.78 31.0 98.4% feature · violin
Secretory Progenitor 26 INSM1-like-1 not mapped 3.53 30.7 40.2% feature · violin
Secretory Progenitor 27 PUR6-like-1 not mapped 1.33 30.5 74.0% feature · violin
Secretory Progenitor 28 FKBP3-like-1 not mapped 1.06 30.1 82.5% feature · violin
Secretory Progenitor 29 SUMO1-like-1 not mapped 0.78 30.0 95.2% feature · violin
Secretory Progenitor 30 Prdm13 not mapped 3.18 29.9 42.2% feature · violin
Secretory Progenitor 31 XP_001633384.1 (NV2.16964) 1.34 29.9 78.0% feature · violin
Secretory Progenitor 32 AKIRB-like-1 not mapped 1.07 29.5 81.5% feature · violin
Secretory Progenitor 33 SMD2-like-1 not mapped 0.76 29.3 96.7% feature · violin
Secretory Progenitor 34 FBX11-like-1 not mapped 3.56 28.9 37.5% feature · violin
Secretory Progenitor 35 IF5A-like-1 not mapped 0.47 28.9 99.1% feature · violin
Secretory Progenitor 36 NOP10-like-1 not mapped 0.97 28.0 84.3% feature · violin
Secretory Progenitor 37 MAX-like-1 not mapped 0.95 28.0 81.5% feature · violin
Secretory Progenitor 38 SMD1-like-1 not mapped 0.79 27.6 93.4% feature · violin
Secretory Progenitor 39 NV2.4094 not mapped 1.45 27.6 59.6% feature · violin
Secretory Progenitor 40 MSIR6-like-2 not mapped 0.79 27.3 91.7% feature · violin
Secretory Progenitor 41 PP12C-like-11 not mapped 1.81 27.3 51.1% feature · violin
Secretory Progenitor 42 DAD1-like-1 not mapped 0.65 27.3 96.2% feature · violin
Secretory Progenitor 43 LLPH-like-4 not mapped 1.11 27.1 72.9% feature · violin
Secretory Progenitor 44 PA2G4-like-1 not mapped 1.07 26.2 71.7% feature · violin
Secretory Progenitor 45 CYBP-like-1 not mapped 1.06 26.1 69.6% feature · violin
Secretory Progenitor 46 AshB not mapped 2.78 25.8 36.7% feature · violin
Secretory Progenitor 47 RUXF-like-1 not mapped 0.68 25.7 93.5% feature · violin
Secretory Progenitor 48 RS16-like-1 not mapped 0.35 25.7 99.8% feature · violin
Secretory Progenitor 49 CBF5-like-1 not mapped 0.95 25.4 78.7% feature · violin
Secretory Progenitor 50 RS20-like-1 not mapped 0.36 25.1 99.7% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 45 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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