Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Ectoderm25986 Secretory Progenitor2713 Endoderm2055 Unannotated1542 Mesoderm1489 Cnidocytes1471 Neuronal730 Gland Cells564

Showing the cell type that NV2.17394 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cnidocytes 1 XP_032218917.1 (NV2.10686) 8.90 53.7 84.0% feature · violin
Cnidocytes 2 XP_032226109.2 (NV2.13045) 8.88 49.2 75.9% feature · violin
Cnidocytes 3 BRN3-like-1 not mapped 6.67 48.5 75.9% feature · violin
Cnidocytes 4 XP_001641112.2 (NV2.11720) 8.62 47.4 73.3% feature · violin
Cnidocytes 5 NFH-like-4 not mapped 7.98 45.5 71.0% feature · violin
Cnidocytes 6 XP_001635203.1 (NV2.18211) 4.77 45.1 74.5% feature · violin
Cnidocytes 7 PPIB-like-5 not mapped 9.81 44.9 69.2% feature · violin
Cnidocytes 8 FKBP2-like-1 not mapped 9.56 44.6 68.9% feature · violin
Cnidocytes 9 DKK3-like-11 not mapped 8.27 44.4 68.7% feature · violin
Cnidocytes 10 OPSD2-like-3 not mapped 6.75 44.3 69.7% feature · violin
Cnidocytes 11 MARCO-like-2 not mapped 7.11 44.0 69.7% feature · violin
Cnidocytes 12 EVA1C-like-3 not mapped 8.91 43.9 68.0% feature · violin
Cnidocytes 13 ZNF845 not mapped 7.31 43.1 67.2% feature · violin
Cnidocytes 14 XP_032233227.2 (NV2.18394) 6.13 42.9 67.7% feature · violin
Cnidocytes 15 Ncol6 not mapped 7.97 42.5 67.4% feature · violin
Cnidocytes 16 DCX-like-1 not mapped 3.77 42.2 74.8% feature · violin
Cnidocytes 17 TXD12-like-2 not mapped 6.23 42.2 66.9% feature · violin
Cnidocytes 18 XP_032222353.2 (NV2.11821) 8.80 41.9 64.8% feature · violin
Cnidocytes 19 MATN1-like-2 not mapped 9.44 41.6 64.2% feature · violin
Cnidocytes 20 XP_032238867.2 (NV2.9534) 8.62 41.1 63.6% feature · violin
Cnidocytes 21 NV2.11721 not mapped 8.02 41.0 64.0% feature · violin
Cnidocytes 22 NEP11 not mapped 2.34 40.5 87.6% feature · violin
Cnidocytes 23 FOXD1-like-1 not mapped 6.59 40.0 62.9% feature · violin
Cnidocytes 24 DCBD2-like-1 not mapped 8.54 39.5 61.3% feature · violin
Cnidocytes 25 SC61G-like-1 not mapped 1.43 39.5 97.6% feature · violin
Cnidocytes 26 NV2.17392 not mapped 8.54 39.1 60.5% feature · violin
Cnidocytes 27 NV2.23423 not mapped 8.25 38.9 60.2% feature · violin
Cnidocytes 28 XP_032233324.1 (NV2.6073) 8.67 38.9 60.0% feature · violin
Cnidocytes 29 SERP2-like-1 not mapped 1.33 38.6 96.7% feature · violin
Cnidocytes 30 NV2.23844 not mapped 6.84 38.3 59.8% feature · violin
Cnidocytes 31 P4HTM-like-27 not mapped 9.36 38.0 58.6% feature · violin
Cnidocytes 32 Prdm13 not mapped 4.19 37.4 64.4% feature · violin
Cnidocytes 33 Ncol4 not mapped 8.75 36.8 57.2% feature · violin
Cnidocytes 34 PGCB-like-7 not mapped 7.95 36.8 56.9% feature · violin
Cnidocytes 35 GUS-like-1 not mapped 3.17 36.0 67.8% feature · violin
Cnidocytes 36 XP_048584685.1 (NV2.17394) 8.88 35.7 55.1% feature · violin
Cnidocytes 37 COHA1-like-2 not mapped 8.79 35.5 55.0% feature · violin
Cnidocytes 38 TMEDA-like-1 not mapped 3.20 35.3 66.6% feature · violin
Cnidocytes 39 AMPN-like-1 not mapped 8.65 35.1 54.2% feature · violin
Cnidocytes 40 MTF2-like-1 not mapped 4.34 34.9 57.6% feature · violin
Cnidocytes 41 NV2.10282 not mapped 7.42 34.4 53.4% feature · violin
Cnidocytes 42 FKBP2-like-5 not mapped 3.02 34.3 67.8% feature · violin
Cnidocytes 43 FLOWR-like-1 not mapped 4.35 34.0 56.6% feature · violin
Cnidocytes 44 Ncol1 not mapped 7.63 33.8 53.0% feature · violin
Cnidocytes 45 NV2.25695 not mapped 8.25 33.7 52.7% feature · violin
Cnidocytes 46 SC61B-like-1 not mapped 1.20 33.6 96.5% feature · violin
Cnidocytes 47 ID4-like-2 not mapped 4.55 33.5 56.4% feature · violin
Cnidocytes 48 LMO4B-like-1 not mapped 3.32 33.4 60.4% feature · violin
Cnidocytes 49 BIR7B-like-1 not mapped 6.10 33.3 53.1% feature · violin
Cnidocytes 50 NEP4 not mapped 8.49 33.3 51.5% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 41 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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