Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that NV2.19830 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Gland Cells 1 NV2.3425 not mapped 10.85 39.3 96.5% feature · violin
Gland Cells 2 FKB14-like-1 not mapped 11.04 37.9 93.3% feature · violin
Gland Cells 3 ALK-like-1 not mapped 10.17 37.2 91.3% feature · violin
Gland Cells 4 NV2.22820 not mapped 9.65 36.9 90.8% feature · violin
Gland Cells 5 NV2.21610 not mapped 9.97 35.6 87.4% feature · violin
Gland Cells 6 NV2.7431 not mapped 8.36 34.6 85.3% feature · violin
Gland Cells 7 creb-like2 not mapped 6.09 34.4 87.8% feature · violin
Gland Cells 8 SPEE-like-2 not mapped 10.31 34.3 84.2% feature · violin
Gland Cells 9 XP_001635203.1 (NV2.18211) 5.51 34.0 87.9% feature · violin
Gland Cells 10 CD151-like-2 not mapped 6.54 33.6 84.8% feature · violin
Gland Cells 11 ID4-like-2 not mapped 6.59 33.3 84.8% feature · violin
Gland Cells 12 AHNK-like-9 not mapped 10.06 33.0 81.0% feature · violin
Gland Cells 13 XP_001625447.3 (NV2.3667) 9.69 31.9 78.5% feature · violin
Gland Cells 14 NOT2-like-4 not mapped 9.82 31.6 77.7% feature · violin
Gland Cells 15 Mucin not mapped 10.34 31.4 77.0% feature · violin
Gland Cells 16 CSC1-like-1 not mapped 5.34 31.2 81.4% feature · violin
Gland Cells 17 INSM1-like-1 not mapped 5.81 31.0 80.1% feature · violin
Gland Cells 18 CS012-like-2 not mapped 4.64 30.2 79.8% feature · violin
Gland Cells 19 GBGE-like-1 not mapped 4.95 29.7 78.4% feature · violin
Gland Cells 20 BTG1-like-2 not mapped 1.94 29.5 98.4% feature · violin
Gland Cells 21 CRAM-like-6 not mapped 9.90 29.5 72.5% feature · violin
Gland Cells 22 FLOWR-like-1 not mapped 5.14 29.4 75.9% feature · violin
Gland Cells 23 ERGI1-like-1 not mapped 4.34 29.4 79.1% feature · violin
Gland Cells 24 NV2.5209 not mapped 7.54 28.9 71.6% feature · violin
Gland Cells 25 B4GT1-like-1 not mapped 10.41 28.4 69.7% feature · violin
Gland Cells 26 CSRN3-like-1 not mapped 5.40 28.4 73.0% feature · violin
Gland Cells 27 OSTCB-like-1 not mapped 1.71 28.0 95.4% feature · violin
Gland Cells 28 ARF4-like-1 not mapped 2.11 28.0 94.1% feature · violin
Gland Cells 29 ERD22-like-1 not mapped 2.73 27.8 89.2% feature · violin
Gland Cells 30 PMGT1-like-2 not mapped 6.34 27.7 69.9% feature · violin
Gland Cells 31 TMEDA-like-2 not mapped 2.58 27.7 88.8% feature · violin
Gland Cells 32 GFPT1-like-1 not mapped 3.31 27.7 80.3% feature · violin
Gland Cells 33 OTOR-like-1 not mapped 3.09 27.7 85.1% feature · violin
Gland Cells 34 STL1-like-2 not mapped 7.54 27.6 68.4% feature · violin
Gland Cells 35 NV2.11883 not mapped 9.67 27.6 67.7% feature · violin
Gland Cells 36 DPM3-like-1 not mapped 2.77 27.3 84.6% feature · violin
Gland Cells 37 B4GN4-like-25 not mapped 8.83 27.3 67.2% feature · violin
Gland Cells 38 B3GT1-like-10 not mapped 10.14 26.9 66.0% feature · violin
Gland Cells 39 NV2.8475 not mapped 2.31 26.5 89.5% feature · violin
Gland Cells 40 PMM-like-6 not mapped 2.98 26.5 81.0% feature · violin
Gland Cells 41 XP_048585683.1 (NV2.19830) 10.11 26.4 64.9% feature · violin
Gland Cells 42 SURF4-like-2 not mapped 1.91 26.4 95.0% feature · violin
Gland Cells 43 COLL4-like-7 not mapped 2.80 26.4 84.6% feature · violin
Gland Cells 44 KISHB-like-1 not mapped 2.97 26.1 78.7% feature · violin
Gland Cells 45 TMED7-like-1 not mapped 2.98 26.0 80.3% feature · violin
Gland Cells 46 SERP2-like-1 not mapped 1.45 25.9 97.7% feature · violin
Gland Cells 47 HMCN1-like-100 not mapped 6.91 25.5 63.3% feature · violin
Gland Cells 48 DYLT5-like-3 not mapped 6.01 25.4 64.0% feature · violin
Gland Cells 49 RFX4-like not mapped 6.57 25.4 63.5% feature · violin
Gland Cells 50 OST4-like-1 not mapped 1.42 25.4 97.3% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 47 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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