Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that TMED7-like-1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Gland Cells 1 NV2.3425 10.85 39.3 96.5% feature · violin
Gland Cells 2 FKB14-like-1 11.04 37.9 93.3% feature · violin
Gland Cells 3 ALK-like-1 10.17 37.2 91.3% feature · violin
Gland Cells 4 NV2.22820 9.65 36.9 90.8% feature · violin
Gland Cells 5 NV2.21610 9.97 35.6 87.4% feature · violin
Gland Cells 6 NV2.7431 8.36 34.6 85.3% feature · violin
Gland Cells 7 creb-like2 6.09 34.4 87.8% feature · violin
Gland Cells 8 SPEE-like-2 10.31 34.3 84.2% feature · violin
Gland Cells 9 NV2.18211 5.51 34.0 87.9% feature · violin
Gland Cells 10 CD151-like-2 6.54 33.6 84.8% feature · violin
Gland Cells 11 ID4-like-2 6.59 33.3 84.8% feature · violin
Gland Cells 12 AHNK-like-9 10.06 33.0 81.0% feature · violin
Gland Cells 13 NV2.3667 9.69 31.9 78.5% feature · violin
Gland Cells 14 NOT2-like-4 9.82 31.6 77.7% feature · violin
Gland Cells 15 Mucin 10.34 31.4 77.0% feature · violin
Gland Cells 16 CSC1-like-1 5.34 31.2 81.4% feature · violin
Gland Cells 17 INSM1-like-1 5.81 31.0 80.1% feature · violin
Gland Cells 18 CS012-like-2 4.64 30.2 79.8% feature · violin
Gland Cells 19 GBGE-like-1 4.95 29.7 78.4% feature · violin
Gland Cells 20 BTG1-like-2 1.94 29.5 98.4% feature · violin
Gland Cells 21 CRAM-like-6 9.90 29.5 72.5% feature · violin
Gland Cells 22 FLOWR-like-1 5.14 29.4 75.9% feature · violin
Gland Cells 23 ERGI1-like-1 4.34 29.4 79.1% feature · violin
Gland Cells 24 NV2.5209 7.54 28.9 71.6% feature · violin
Gland Cells 25 B4GT1-like-1 10.41 28.4 69.7% feature · violin
Gland Cells 26 CSRN3-like-1 5.40 28.4 73.0% feature · violin
Gland Cells 27 OSTCB-like-1 1.71 28.0 95.4% feature · violin
Gland Cells 28 ARF4-like-1 2.11 28.0 94.1% feature · violin
Gland Cells 29 ERD22-like-1 2.73 27.8 89.2% feature · violin
Gland Cells 30 PMGT1-like-2 6.34 27.7 69.9% feature · violin
Gland Cells 31 TMEDA-like-2 2.58 27.7 88.8% feature · violin
Gland Cells 32 GFPT1-like-1 3.31 27.7 80.3% feature · violin
Gland Cells 33 OTOR-like-1 3.09 27.7 85.1% feature · violin
Gland Cells 34 STL1-like-2 7.54 27.6 68.4% feature · violin
Gland Cells 35 NV2.11883 9.67 27.6 67.7% feature · violin
Gland Cells 36 DPM3-like-1 2.77 27.3 84.6% feature · violin
Gland Cells 37 B4GN4-like-25 8.83 27.3 67.2% feature · violin
Gland Cells 38 B3GT1-like-10 10.14 26.9 66.0% feature · violin
Gland Cells 39 NV2.8475 2.31 26.5 89.5% feature · violin
Gland Cells 40 PMM-like-6 2.98 26.5 81.0% feature · violin
Gland Cells 41 NV2.19830 10.11 26.4 64.9% feature · violin
Gland Cells 42 SURF4-like-2 1.91 26.4 95.0% feature · violin
Gland Cells 43 COLL4-like-7 2.80 26.4 84.6% feature · violin
Gland Cells 44 KISHB-like-1 2.97 26.1 78.7% feature · violin
Gland Cells 45 TMED7-like-1 2.98 26.0 80.3% feature · violin
Gland Cells 46 SERP2-like-1 1.45 25.9 97.7% feature · violin
Gland Cells 47 HMCN1-like-100 6.91 25.5 63.3% feature · violin
Gland Cells 48 DYLT5-like-3 6.01 25.4 64.0% feature · violin
Gland Cells 49 RFX4-like 6.57 25.4 63.5% feature · violin
Gland Cells 50 OST4-like-1 1.42 25.4 97.3% feature · violin
TOP