Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Ectoderm11169 Secretory Progenitor1918 Mesoderm1622 Endoderm1615 Neuronal915 Cnidocytes911 Gland Cells894

Showing the cell type that CS012-like-2 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Gland Cells 1 NV2.3425 not mapped 9.28 48.9 97.5% feature · violin
Gland Cells 2 FKB14-like-1 not mapped 8.97 48.6 97.1% feature · violin
Gland Cells 3 NV2.21610 not mapped 8.42 46.9 93.5% feature · violin
Gland Cells 4 ALK-like-1 not mapped 8.62 46.7 93.0% feature · violin
Gland Cells 5 NV2.22820 not mapped 8.83 46.5 92.5% feature · violin
Gland Cells 6 creb-like2 not mapped 5.37 45.5 93.5% feature · violin
Gland Cells 7 AHNK-like-9 not mapped 8.47 44.8 89.4% feature · violin
Gland Cells 8 XP_001625447.3 (NV2.3667) 8.11 44.2 89.1% feature · violin
Gland Cells 9 NV2.7431 not mapped 7.27 42.5 85.0% feature · violin
Gland Cells 10 SPEE-like-2 not mapped 8.65 42.1 83.8% feature · violin
Gland Cells 11 ID4-like-2 not mapped 5.20 42.1 89.7% feature · violin
Gland Cells 12 CSC1-like-1 not mapped 4.92 42.1 87.6% feature · violin
Gland Cells 13 NV2.5209 not mapped 6.73 42.1 84.9% feature · violin
Gland Cells 14 NOT2-like-4 not mapped 8.60 41.6 82.8% feature · violin
Gland Cells 15 XP_001635203.1 (NV2.18211) 4.40 41.4 89.7% feature · violin
Gland Cells 16 Mucin not mapped 8.81 41.3 82.1% feature · violin
Gland Cells 17 CD151-like-2 not mapped 5.54 40.9 85.1% feature · violin
Gland Cells 18 INSM1-like-1 not mapped 4.99 38.9 83.8% feature · violin
Gland Cells 19 NV2.18034 not mapped 5.25 37.6 77.7% feature · violin
Gland Cells 20 CRAM-like-6 not mapped 7.90 37.6 75.6% feature · violin
Gland Cells 21 PMGT1-like-2 not mapped 6.06 36.8 74.7% feature · violin
Gland Cells 22 OSTCB-like-1 not mapped 1.48 36.6 99.3% feature · violin
Gland Cells 23 B4GN4-like-25 not mapped 8.25 36.3 72.1% feature · violin
Gland Cells 24 SURF4-like-2 not mapped 1.68 36.1 98.7% feature · violin
Gland Cells 25 ALDOC-like-1 not mapped 2.23 35.7 92.3% feature · violin
Gland Cells 26 MGT4C-like-2 not mapped 4.95 35.6 74.5% feature · violin
Gland Cells 27 ESRP2-like-1 not mapped 5.74 35.5 72.5% feature · violin
Gland Cells 28 GFPT1-like-1 not mapped 2.62 35.5 90.0% feature · violin
Gland Cells 29 B3GT1-like-10 not mapped 8.88 35.4 70.4% feature · violin
Gland Cells 30 DPM3-like-1 not mapped 3.09 34.8 82.2% feature · violin
Gland Cells 31 STL1-like-2 not mapped 6.19 34.7 70.2% feature · violin
Gland Cells 32 XP_032232822.1 (NV2.4247) 7.98 34.7 69.2% feature · violin
Gland Cells 33 CS012-like-2 not mapped 4.35 34.3 73.3% feature · violin
Gland Cells 34 MGT5A-like-1 not mapped 5.78 33.8 69.1% feature · violin
Gland Cells 35 NV2.11883 not mapped 8.76 33.7 66.9% feature · violin
Gland Cells 36 PAPSS-like-1 not mapped 3.81 33.2 73.9% feature · violin
Gland Cells 37 OTOR-like-1 not mapped 2.58 33.1 86.1% feature · violin
Gland Cells 38 RLA0-like-1 not mapped 0.76 32.6 100.0% feature · violin
Gland Cells 39 DOX2-like-2 not mapped 8.02 32.5 64.8% feature · violin
Gland Cells 40 SERP2-like-1 not mapped 1.23 32.5 99.7% feature · violin
Gland Cells 41 BTG1-like-2 not mapped 1.49 32.2 99.2% feature · violin
Gland Cells 42 ERGI1-like-1 not mapped 3.86 32.1 71.3% feature · violin
Gland Cells 43 XP_032220441.2 (NV2.16639) 7.95 31.1 62.0% feature · violin
Gland Cells 44 NV2.17583 not mapped 5.78 30.8 63.0% feature · violin
Gland Cells 45 XP_048585683.1 (NV2.19830) 8.43 30.8 61.2% feature · violin
Gland Cells 46 AGRL3-like-5 not mapped 5.11 30.6 63.5% feature · violin
Gland Cells 47 COLL4-like-7 not mapped 2.21 30.5 85.5% feature · violin
Gland Cells 48 NV2.8475 not mapped 2.31 30.5 84.5% feature · violin
Gland Cells 49 FLOWR-like-1 not mapped 4.26 30.4 65.5% feature · violin
Gland Cells 50 XP_032222422.1 (NV2.11604) 2.12 30.2 85.5% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 44 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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