Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Ectoderm11169 Secretory Progenitor1918 Mesoderm1622 Endoderm1615 Neuronal915 Cnidocytes911 Gland Cells894

Showing the cell type that GP2-like-62 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Ectoderm 1 XP_048577262.1 (NV2.9154) 5.17 106.5 99.4% feature · violin
Ectoderm 2 XP_001628339.1 (NV2.6591) 4.40 104.0 97.9% feature · violin
Ectoderm 3 Actin6 not mapped 3.90 93.3 90.7% feature · violin
Ectoderm 4 CD63-like-12 not mapped 3.94 89.2 86.2% feature · violin
Ectoderm 5 GP2-like-62 not mapped 3.83 86.5 86.2% feature · violin
Ectoderm 6 XP_048577623.1 (NV2.8285) 4.21 83.8 85.1% feature · violin
Ectoderm 7 NV2.12310 not mapped 3.35 79.3 79.5% feature · violin
Ectoderm 8 XP_048590043.1 (NV2.5699) 3.38 77.7 84.7% feature · violin
Ectoderm 9 NV2.9834 not mapped 4.79 77.0 78.4% feature · violin
Ectoderm 10 PCR7-like-1 not mapped 3.26 76.6 81.1% feature · violin
Ectoderm 11 ACTB-like-4 not mapped 2.80 73.9 85.6% feature · violin
Ectoderm 12 CALU-like-8 not mapped 2.92 73.1 85.5% feature · violin
Ectoderm 13 DMBT1-like-28 not mapped 3.09 70.9 74.9% feature · violin
Ectoderm 14 SON-like-3 not mapped 2.62 70.7 81.9% feature · violin
Ectoderm 15 NV2.8570 not mapped 1.33 69.0 100.0% feature · violin
Ectoderm 16 XP_001627227.1 (NV2.13764) 2.08 68.8 90.5% feature · violin
Ectoderm 17 GP2-like-43 not mapped 3.89 64.9 64.1% feature · violin
Ectoderm 18 XP_048590519.1 (NV2.6574) 3.34 60.8 67.5% feature · violin
Ectoderm 19 NV2.2154 not mapped 2.79 60.2 65.2% feature · violin
Ectoderm 20 THIO-like-8 not mapped 1.09 57.9 97.0% feature · violin
Ectoderm 21 Nv4 not mapped 3.71 56.7 56.0% feature · violin
Ectoderm 22 NV2.9832 not mapped 4.55 56.5 53.4% feature · violin
Ectoderm 23 XP_048576582.1 (NV2.4646) 2.10 55.2 69.7% feature · violin
Ectoderm 24 CSRP1-like-3 not mapped 1.55 54.5 83.1% feature · violin
Ectoderm 25 Calmodulin not mapped 1.63 54.3 96.3% feature · violin
Ectoderm 26 1433E-like-1 not mapped 2.85 54.2 57.7% feature · violin
Ectoderm 27 CALM-like-29 not mapped 2.86 53.7 57.9% feature · violin
Ectoderm 28 NV2.15494 not mapped 2.96 53.6 57.8% feature · violin
Ectoderm 29 SCRY2-like-1 not mapped 1.45 52.2 88.7% feature · violin
Ectoderm 30 XP_048578358.1 (NV2.9836) 4.31 51.8 49.0% feature · violin
Ectoderm 31 XP_048583089.1 (NV2.16537) 2.21 51.3 63.1% feature · violin
Ectoderm 32 XP_001641234.1 (NV2.18050) 4.02 50.9 57.3% feature · violin
Ectoderm 33 MGST1-like-1 not mapped 1.98 50.9 65.8% feature · violin
Ectoderm 34 NV2.13766 not mapped 2.63 50.3 56.2% feature · violin
Ectoderm 35 CANB-like-2 not mapped 1.99 50.2 64.0% feature · violin
Ectoderm 36 CRIP1-like-1 not mapped 1.84 50.0 72.3% feature · violin
Ectoderm 37 MLC2-like-7 not mapped 3.10 49.4 50.5% feature · violin
Ectoderm 38 XP_001631379.2 (NV2.15796) 3.12 48.3 49.6% feature · violin
Ectoderm 39 PAO1-like-4 not mapped 3.62 48.0 46.1% feature · violin
Ectoderm 40 XP_048588588.1 (NV2.22717) 2.72 48.0 51.6% feature · violin
Ectoderm 41 DLRB2-like-7 not mapped 2.53 47.8 53.4% feature · violin
Ectoderm 42 Sox3 not mapped 2.02 47.2 61.6% feature · violin
Ectoderm 43 NV2.19908 not mapped 1.97 47.1 60.8% feature · violin
Ectoderm 44 XP_032226202.2 (NV2.23636) 4.53 46.1 42.2% feature · violin
Ectoderm 45 KDM8-like-4 not mapped 2.47 45.8 52.0% feature · violin
Ectoderm 46 XP_001640083.2 (NV2.6961) 1.03 45.2 97.0% feature · violin
Ectoderm 47 LAMA2-like-5 not mapped 3.87 45.1 42.6% feature · violin
Ectoderm 48 XP_032231580.2 (NV2.12763) 2.13 45.0 56.2% feature · violin
Ectoderm 49 DLRB2-like-6 not mapped 2.23 44.7 54.0% feature · violin
Ectoderm 50 NAT8-like-2 not mapped 2.58 44.4 49.3% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 35 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

TOP