Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Ectoderm11169 Secretory Progenitor1918 Mesoderm1622 Endoderm1615 Neuronal915 Cnidocytes911 Gland Cells894

Showing the cell type that NV2.20715 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Secretory Progenitor 1 XP_001633864.1 (NV2.13863) 3.21 54.4 97.0% feature · violin
Secretory Progenitor 2 SoxC not mapped 2.89 42.3 77.0% feature · violin
Secretory Progenitor 3 NV2.9336 not mapped 3.26 35.6 59.6% feature · violin
Secretory Progenitor 4 myc1 not mapped 2.81 32.0 56.2% feature · violin
Secretory Progenitor 5 XP_001623650.2 (NV2.16803) 1.22 29.4 90.4% feature · violin
Secretory Progenitor 6 CH10-like-1 not mapped 1.08 29.1 94.2% feature · violin
Secretory Progenitor 7 HSP7C-like-1 not mapped 1.46 27.3 86.4% feature · violin
Secretory Progenitor 8 IF2P-like-1 not mapped 1.12 27.0 88.9% feature · violin
Secretory Progenitor 9 MARH1-like-1 not mapped 2.79 26.7 46.1% feature · violin
Secretory Progenitor 10 HS90A-like-1 not mapped 1.37 26.0 90.4% feature · violin
Secretory Progenitor 11 NDKB-like-2 not mapped 0.60 25.7 99.3% feature · violin
Secretory Progenitor 12 IF5A-like-1 not mapped 0.52 25.7 99.5% feature · violin
Secretory Progenitor 13 CATL-like-3 not mapped 1.49 25.6 83.1% feature · violin
Secretory Progenitor 14 CDN1A-like-1 not mapped 1.75 24.8 61.3% feature · violin
Secretory Progenitor 15 PSB3-like-1 not mapped 0.94 23.8 86.1% feature · violin
Secretory Progenitor 16 Prdm13 not mapped 2.58 23.0 43.0% feature · violin
Secretory Progenitor 17 PG12A-like-1 not mapped 1.24 22.9 73.5% feature · violin
Secretory Progenitor 18 XP_048581358.1 (NV2.15276) 1.04 22.8 80.6% feature · violin
Secretory Progenitor 19 SoxB.2 not mapped 2.13 22.8 46.4% feature · violin
Secretory Progenitor 20 Myc3 not mapped 2.40 22.5 41.7% feature · violin
Secretory Progenitor 21 RS23-like-2 not mapped 0.39 22.3 99.6% feature · violin
Secretory Progenitor 22 NEP11 not mapped 0.80 22.2 97.4% feature · violin
Secretory Progenitor 23 XP_032228492.2 (NV2.20715) 0.82 21.8 85.5% feature · violin
Secretory Progenitor 24 NV2.24796 not mapped 1.14 21.3 69.4% feature · violin
Secretory Progenitor 25 BTG1-like-2 not mapped 0.72 20.9 95.0% feature · violin
Secretory Progenitor 26 FBRL-like-1 not mapped 1.10 20.8 68.2% feature · violin
Secretory Progenitor 27 MAFG-like-7 not mapped 1.18 20.7 76.0% feature · violin
Secretory Progenitor 28 RL12-like-1 not mapped 0.32 20.6 99.9% feature · violin
Secretory Progenitor 29 EBP2-like-1 not mapped 1.09 20.4 67.6% feature · violin
Secretory Progenitor 30 NH2L1-like-1 not mapped 1.02 20.3 74.9% feature · violin
Secretory Progenitor 31 RS29-like-4 not mapped 0.36 20.0 99.5% feature · violin
Secretory Progenitor 32 PUR6-like-1 not mapped 1.27 19.9 57.1% feature · violin
Secretory Progenitor 33 CH60A-like-1 not mapped 0.96 19.6 74.3% feature · violin
Secretory Progenitor 34 HARS1-like-1 not mapped 1.03 19.6 67.2% feature · violin
Secretory Progenitor 35 CHCH2-like-1 not mapped 0.82 19.5 88.1% feature · violin
Secretory Progenitor 36 POMP-like-1 not mapped 0.83 18.9 76.7% feature · violin
Secretory Progenitor 37 CYBP-like-1 not mapped 1.16 18.9 57.7% feature · violin
Secretory Progenitor 38 L2CC-like-1 not mapped 0.83 18.6 75.2% feature · violin
Secretory Progenitor 39 BIP-like-1 not mapped 1.15 18.5 82.1% feature · violin
Secretory Progenitor 40 NV2.16520 not mapped 1.19 18.4 55.2% feature · violin
Secretory Progenitor 41 XP_001639719.1 (NV2.23615) 1.23 18.4 70.6% feature · violin
Secretory Progenitor 42 FGFa1 not mapped 1.80 18.4 40.6% feature · violin
Secretory Progenitor 43 IF1AY-like-1 not mapped 0.73 18.3 84.2% feature · violin
Secretory Progenitor 44 GRPE1-like-1 not mapped 1.05 18.2 60.6% feature · violin
Secretory Progenitor 45 AKIRB-like-1 not mapped 0.94 18.2 67.6% feature · violin
Secretory Progenitor 46 PRDX5-like-1 not mapped 0.69 18.2 91.6% feature · violin
Secretory Progenitor 47 ATF4 not mapped 0.68 18.1 93.4% feature · violin
Secretory Progenitor 48 XP_001626867.1 (NV2.24815) 0.91 18.0 68.4% feature · violin
Secretory Progenitor 49 DAD1-like-1 not mapped 0.60 17.9 96.7% feature · violin
Secretory Progenitor 50 IF2B-like-1 not mapped 0.65 17.7 88.8% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 44 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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