Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Ectoderm11169 Secretory Progenitor1918 Mesoderm1622 Endoderm1615 Neuronal915 Cnidocytes911 Gland Cells894

Showing the cell type that TIL-like-1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Mesoderm 1 NV2.6264 not mapped 6.65 63.6 99.9% feature · violin
Mesoderm 2 MCPI-like-1 not mapped 6.57 63.4 96.5% feature · violin
Mesoderm 3 COTL1-like-1 not mapped 4.39 61.6 98.6% feature · violin
Mesoderm 4 ACTC-like-6 not mapped 2.92 55.7 99.8% feature · violin
Mesoderm 5 RS2-like-1 not mapped 0.90 55.3 100.0% feature · violin
Mesoderm 6 VKT2-like-1 not mapped 6.98 53.8 81.8% feature · violin
Mesoderm 7 FRIS-like-8 not mapped 5.92 52.8 82.0% feature · violin
Mesoderm 8 RL26-like-1 not mapped 0.88 52.2 100.0% feature · violin
Mesoderm 9 TIL-like-1 not mapped 5.05 52.1 83.0% feature · violin
Mesoderm 10 SPRC-like-10 not mapped 7.25 51.9 78.9% feature · violin
Mesoderm 11 RS27-like-1 not mapped 0.82 51.0 100.0% feature · violin
Mesoderm 12 NV2.14515 not mapped 3.57 50.0 88.3% feature · violin
Mesoderm 13 RS26-like-1 not mapped 0.70 49.1 100.0% feature · violin
Mesoderm 14 HEBP2-like-1 not mapped 6.97 48.7 74.1% feature · violin
Mesoderm 15 RLA2-like-1 not mapped 0.75 48.7 100.0% feature · violin
Mesoderm 16 Perl not mapped 6.56 47.0 71.7% feature · violin
Mesoderm 17 RS12-like-1 not mapped 0.73 46.9 100.0% feature · violin
Mesoderm 18 RS24-like-1 not mapped 0.70 46.4 100.0% feature · violin
Mesoderm 19 MELC5 not mapped 3.04 46.4 87.5% feature · violin
Mesoderm 20 RS25-like-1 not mapped 0.71 45.1 100.0% feature · violin
Mesoderm 21 RS23-like-1 not mapped 0.87 45.0 100.0% feature · violin
Mesoderm 22 RS8-like-1 not mapped 0.67 44.9 100.0% feature · violin
Mesoderm 23 RS11-like-2 not mapped 0.71 44.8 100.0% feature · violin
Mesoderm 24 TICN2-like-1 not mapped 6.51 44.6 68.0% feature · violin
Mesoderm 25 RL31-like-1 not mapped 0.69 44.3 99.9% feature · violin
Mesoderm 26 XP_001636442.3 (NV2.101) 2.96 43.9 85.9% feature · violin
Mesoderm 27 RL27A-like-1 not mapped 0.62 43.2 100.0% feature · violin
Mesoderm 28 ZF-C3H1 not mapped 4.73 43.1 68.7% feature · violin
Mesoderm 29 RS21-like-1 not mapped 0.65 41.9 100.0% feature · violin
Mesoderm 30 AT5G2-like-1 not mapped 0.64 41.7 100.0% feature · violin
Mesoderm 31 RL32-like-1 not mapped 0.62 41.3 100.0% feature · violin
Mesoderm 32 NV2.3734 not mapped 6.58 41.3 63.0% feature · violin
Mesoderm 33 RL13A-like-1 not mapped 0.61 41.0 100.0% feature · violin
Mesoderm 34 RS14-like-1 not mapped 0.58 40.8 100.0% feature · violin
Mesoderm 35 UD2B2-like-1 not mapped 5.15 40.6 63.6% feature · violin
Mesoderm 36 RL23-like-1 not mapped 0.56 40.3 100.0% feature · violin
Mesoderm 37 CO4A2-like-1 not mapped 6.36 40.1 61.4% feature · violin
Mesoderm 38 RS9-like-1 not mapped 0.56 39.9 100.0% feature · violin
Mesoderm 39 RS15-like-1 not mapped 0.55 39.8 100.0% feature · violin
Mesoderm 40 RS17-like-1 not mapped 0.59 39.7 100.0% feature · violin
Mesoderm 41 Antp-like4 not mapped 6.15 39.6 60.7% feature · violin
Mesoderm 42 RS16-like-1 not mapped 0.57 39.5 100.0% feature · violin
Mesoderm 43 AIF1-like-1 not mapped 3.58 39.4 68.1% feature · violin
Mesoderm 44 SPRC-like-16 not mapped 6.85 39.3 59.7% feature · violin
Mesoderm 45 RS10-like-1 not mapped 0.53 39.3 100.0% feature · violin
Mesoderm 46 RS3A-like-1 not mapped 0.58 39.2 100.0% feature · violin
Mesoderm 47 CLIC3-like-1 not mapped 3.78 38.7 65.4% feature · violin
Mesoderm 48 RL13-like-1 not mapped 0.58 38.4 99.9% feature · violin
Mesoderm 49 NPC2-like-1 not mapped 2.22 38.3 83.8% feature · violin
Mesoderm 50 RL7-like-1 not mapped 0.64 38.2 99.9% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 49 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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