Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all Ectoderm11169 Secretory Progenitor1918 Mesoderm1622 Endoderm1615 Neuronal915 Cnidocytes911 Gland Cells894

Showing the cell type that ZNF845 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cnidocytes 1 XP_032218917.1 (NV2.10686) 8.79 49.8 98.5% feature · violin
Cnidocytes 2 PPIB-like-5 not mapped 8.78 46.7 92.0% feature · violin
Cnidocytes 3 XP_032226109.2 (NV2.13045) 8.12 46.3 91.4% feature · violin
Cnidocytes 4 BRN3-like-1 not mapped 6.01 46.3 93.1% feature · violin
Cnidocytes 5 FKBP2-like-1 not mapped 8.66 46.2 91.2% feature · violin
Cnidocytes 6 OPSD2-like-3 not mapped 6.56 44.9 89.9% feature · violin
Cnidocytes 7 NFH-like-4 not mapped 8.18 44.6 88.5% feature · violin
Cnidocytes 8 XP_032238867.2 (NV2.9534) 6.57 44.0 88.0% feature · violin
Cnidocytes 9 EVA1C-like-3 not mapped 7.86 43.5 86.5% feature · violin
Cnidocytes 10 XP_001641112.2 (NV2.11720) 7.40 42.4 84.2% feature · violin
Cnidocytes 11 GUS-like-1 not mapped 4.21 41.3 88.5% feature · violin
Cnidocytes 12 NV2.23423 not mapped 6.87 40.7 81.2% feature · violin
Cnidocytes 13 P4HTM-like-27 not mapped 8.94 40.5 79.8% feature · violin
Cnidocytes 14 TXD12-like-2 not mapped 7.74 40.1 79.3% feature · violin
Cnidocytes 15 DCX-like-1 not mapped 4.08 38.9 84.9% feature · violin
Cnidocytes 16 ZNF845 not mapped 5.86 38.8 79.0% feature · violin
Cnidocytes 17 NEP11 not mapped 1.97 38.1 98.0% feature · violin
Cnidocytes 18 DCBD2-like-1 not mapped 7.95 38.0 75.2% feature · violin
Cnidocytes 19 XP_032233324.1 (NV2.6073) 7.69 37.9 74.9% feature · violin
Cnidocytes 20 FKBP2-like-5 not mapped 3.42 37.8 86.3% feature · violin
Cnidocytes 21 MARCO-like-2 not mapped 6.74 37.4 75.4% feature · violin
Cnidocytes 22 XP_032222353.2 (NV2.11821) 7.58 37.3 74.0% feature · violin
Cnidocytes 23 COHA1-like-2 not mapped 7.63 37.1 74.2% feature · violin
Cnidocytes 24 Ncol6 not mapped 6.60 36.5 76.8% feature · violin
Cnidocytes 25 NV2.11721 not mapped 6.43 36.2 73.9% feature · violin
Cnidocytes 26 Sox2 not mapped 5.88 36.1 73.4% feature · violin
Cnidocytes 27 CRA1B-like-2 not mapped 7.56 35.6 70.5% feature · violin
Cnidocytes 28 NV2.17392 not mapped 7.64 35.5 70.6% feature · violin
Cnidocytes 29 XP_048578888.1 (NV2.9862) 8.14 35.3 69.7% feature · violin
Cnidocytes 30 FOXD1-like-1 not mapped 5.84 35.2 71.6% feature · violin
Cnidocytes 31 MATN1-like-2 not mapped 7.76 34.9 69.2% feature · violin
Cnidocytes 32 TMEDA-like-1 not mapped 4.14 34.9 76.0% feature · violin
Cnidocytes 33 Ncol1 not mapped 7.52 34.8 69.6% feature · violin
Cnidocytes 34 XP_032233227.2 (NV2.18394) 5.05 34.5 71.4% feature · violin
Cnidocytes 35 AMPN-like-1 not mapped 7.87 34.2 67.6% feature · violin
Cnidocytes 36 Prdm13 not mapped 3.93 34.2 76.8% feature · violin
Cnidocytes 37 XP_001638986.1 (NV2.767) 8.21 34.1 67.2% feature · violin
Cnidocytes 38 XP_032222235.1 (NV2.11825) 7.84 34.0 67.3% feature · violin
Cnidocytes 39 Ncol4 not mapped 7.12 33.9 68.4% feature · violin
Cnidocytes 40 NV2.25695 not mapped 7.28 33.9 68.6% feature · violin
Cnidocytes 41 NEP4 not mapped 6.94 33.8 67.5% feature · violin
Cnidocytes 42 GILT-like-1 not mapped 7.25 33.7 66.8% feature · violin
Cnidocytes 43 MSRE-like-3 not mapped 7.17 33.5 66.7% feature · violin
Cnidocytes 44 DKK3-like-11 not mapped 7.34 33.3 66.1% feature · violin
Cnidocytes 45 XP_001635203.1 (NV2.18211) 3.38 33.2 78.7% feature · violin
Cnidocytes 46 NV2.23597 not mapped 1.98 33.1 92.9% feature · violin
Cnidocytes 47 NV2.10282 not mapped 7.25 33.0 65.5% feature · violin
Cnidocytes 48 NV2.23844 not mapped 6.02 32.8 66.0% feature · violin
Cnidocytes 49 SMC4B-like-1 not mapped 3.17 32.8 78.2% feature · violin
Cnidocytes 50 S35B1-like-1 not mapped 2.45 32.8 86.4% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Nematostella vectensis, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 39 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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