Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that Ocupat_orphan_896 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
immune_1 1 KAL9985239.1 (Ocupat_v02_G007616) 9.26 35.4 92.5% feature · violin
immune_1 2 KAL9989273.1 (Ocupat_v02_G003806) 5.32 34.7 93.9% feature · violin
immune_1 3 KAL9956816.1 (Ocupat_v02_G038357) 7.32 32.6 86.6% feature · violin
immune_1 4 Ocupat_orphan_896 not mapped 10.83 31.9 83.0% feature · violin
immune_1 5 Ocupat_orphan_4659 not mapped 2.78 31.3 98.4% feature · violin
immune_1 6 KAL9968357.1 (Ocupat_v02_G026718) 6.94 31.1 83.2% feature · violin
immune_1 7 KAL9954497.1 (Ocupat_v02_G042045) 11.20 30.3 78.7% feature · violin
immune_1 8 KAL9956804.1 (Ocupat_v02_G038342) 4.46 29.5 97.4% feature · violin
immune_1 9 KAL9969495.1 (Ocupat_v02_G021715) 5.34 29.3 87.6% feature · violin
immune_1 10 KAL9988008.1 (Ocupat_v02_G002400) 10.38 26.9 70.0% feature · violin
immune_1 11 KAL9989091.1 (Ocupat_v02_G003600) 10.22 26.8 69.6% feature · violin
immune_1 12 KAL9955269.1 (Ocupat_v02_G036567) 3.27 25.4 81.9% feature · violin
immune_1 13 KAL9965848.1 (Ocupat_v02_G029702) 1.37 25.1 99.6% feature · violin
immune_1 14 KAL9963988.1 (Ocupat_v02_G027554) 3.77 24.4 73.6% feature · violin
immune_1 15 KAL9951796.1 (Ocupat_v02_G044525) 9.95 23.9 62.1% feature · violin
immune_1 16 KAL9961543.1 (Ocupat_v02_G030501) 1.62 23.9 97.0% feature · violin
immune_1 17 KAL9982666.1 (Ocupat_v02_G004737) 8.59 23.4 61.1% feature · violin
immune_1 18 KAL9975739.1 (Ocupat_v02_G013035) 9.57 23.2 60.4% feature · violin
immune_1 19 KAL9952100.1 (Ocupat_v02_G039307) 0.76 22.1 100.0% feature · violin
immune_1 20 KAL9980440.1 (Ocupat_v02_G009032) 9.59 21.5 56.0% feature · violin
immune_1 21 KAL9982652.1 (Ocupat_v02_G004735) 7.54 21.3 55.8% feature · violin
immune_1 22 KAL9974502.1 (Ocupat_v02_G011543) 6.19 20.5 55.0% feature · violin
immune_1 23 KAL9964482.1 (Ocupat_v02_G028517) 7.14 20.5 54.0% feature · violin
immune_1 24 KAL9982651.1 (Ocupat_v02_G004720) 6.40 20.2 54.0% feature · violin
immune_1 25 KAL9955563.1 (Ocupat_v02_G036901) 6.18 19.9 53.3% feature · violin
immune_1 26 KAL9967943.1 (Ocupat_v02_G016251) 3.11 19.2 61.7% feature · violin
immune_1 27 KAL9955883.1 (Ocupat_v02_G037280) 3.49 18.7 64.3% feature · violin
immune_1 28 KAL9980057.1 (Ocupat_v02_G008596) 2.39 18.6 79.9% feature · violin
immune_1 29 KAL9953073.1 (Ocupat_v02_G040428) 4.00 18.4 54.4% feature · violin
immune_1 30 KAL9985000.1 (Ocupat_v02_G007351) 2.05 17.7 76.5% feature · violin
immune_1 31 KAL9982665.1 (Ocupat_v02_G004736) 5.78 17.6 47.1% feature · violin
immune_1 32 KAL9988942.1 (Ocupat_v02_G003438) 3.09 17.3 57.4% feature · violin
immune_1 33 KAL9984540.1 (Ocupat_v02_G006845) 2.82 17.2 62.5% feature · violin
immune_1 34 KAL9962861.1 (Ocupat_v02_G032009) 2.16 16.7 80.3% feature · violin
immune_1 35 KAL9966249.1 (Ocupat_v02_G024297) 8.86 16.4 42.8% feature · violin
immune_1 36 KAL9968261.1 (Ocupat_v02_G026613) 8.83 16.4 42.6% feature · violin
immune_1 37 KAL9960716.1 (Ocupat_v02_G034204) 1.39 16.1 99.2% feature · violin
immune_1 38 KAL9987743.1 (Ocupat_v02_G002097) 5.32 15.8 42.8% feature · violin
immune_1 39 KAL9963623.1 (Ocupat_v02_G027140) 9.37 15.8 41.0% feature · violin
immune_1 40 Ocupat_orphan_7924 not mapped 8.95 15.7 41.0% feature · violin
immune_1 41 KAL9975471.1 (Ocupat_v02_G012632) 6.26 15.7 41.6% feature · violin
immune_1 42 KAL9987274.1 (Ocupat_v02_G001555) 3.79 15.5 45.6% feature · violin
immune_1 43 KAL9976060.1 (Ocupat_v02_G013304) 2.05 15.3 67.9% feature · violin
immune_1 44 KAL9989467.1 (Ocupat_v02_G004023) 8.92 15.3 39.8% feature · violin
immune_1 45 KAL9985566.1 (Ocupat_v02_G007987) 8.72 14.8 38.7% feature · violin
immune_1 46 KAL9984912.1 (Ocupat_v02_G007257) 2.61 14.7 52.3% feature · violin
immune_1 47 KAL9959143.1 (Ocupat_v02_G036233) 1.97 14.5 60.0% feature · violin
immune_1 48 KAL9970641.1 (Ocupat_v02_G023051) 1.72 14.4 68.0% feature · violin
immune_1 49 KAL9984000.1 (Ocupat_v02_G006252) 1.81 14.2 66.5% feature · violin
immune_1 50 KAL9954085.1 (Ocupat_v02_G041579) 1.94 13.5 82.6% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Oculina patagonica, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 3 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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