Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that Spis_LOC111345167 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
gastrodermis_alga_hosting 1 PFX21745.1 (Spis_XP_022796708_1) 10.14 45.7 98.8% feature · violin
gastrodermis_alga_hosting 2 PFX27676.1 (Spis_XP_022787119_1) 9.17 44.8 97.2% feature · violin
gastrodermis_alga_hosting 3 Spis_orphan_peak_7126 not mapped 10.23 44.4 96.3% feature · violin
gastrodermis_alga_hosting 4 PFX27833.1 (Spis_XP_022786917_1) 5.79 43.3 96.0% feature · violin
gastrodermis_alga_hosting 5 PFX33847.1 (Spis_XP_022794924_1) 9.91 43.3 93.8% feature · violin
gastrodermis_alga_hosting 6 PFX30874.1 (Spis_XP_022782026_1) 9.64 43.2 93.6% feature · violin
gastrodermis_alga_hosting 7 Spis_LOC111335272 not mapped 9.45 43.1 93.4% feature · violin
gastrodermis_alga_hosting 8 PFX25878.1 (Spis_XP_022790246_1) 1.90 41.9 99.9% feature · violin
gastrodermis_alga_hosting 9 PFX30738.1 (Spis_XP_022782256_1) 7.30 41.6 91.0% feature · violin
gastrodermis_alga_hosting 10 Spis_XP_022782720_1 not mapped 9.33 41.5 89.9% feature · violin
gastrodermis_alga_hosting 11 PFX24698.1 (Spis_XP_022792081_1) 4.68 40.6 95.2% feature · violin
gastrodermis_alga_hosting 12 PFX30772.1 (Spis_XP_022782128_1) 4.56 40.4 94.4% feature · violin
gastrodermis_alga_hosting 13 Spis_orphan_peak_3939 not mapped 8.41 40.4 87.7% feature · violin
gastrodermis_alga_hosting 14 PFX34451.1 (Spis_XP_022785526_1) 4.14 39.6 94.6% feature · violin
gastrodermis_alga_hosting 15 Spis_LOC111342177 not mapped 9.55 39.2 85.0% feature · violin
gastrodermis_alga_hosting 16 Spis_orphan_peak_7489 not mapped 3.77 37.6 94.6% feature · violin
gastrodermis_alga_hosting 17 PFX15487.1 (Spis_XP_022806423_1) 8.00 35.3 77.0% feature · violin
gastrodermis_alga_hosting 18 PFX15028.1 (Spis_XP_022806989_1) 5.33 34.6 78.4% feature · violin
gastrodermis_alga_hosting 19 Spis_orphan_peak_11414 not mapped 4.62 34.5 89.5% feature · violin
gastrodermis_alga_hosting 20 Spis_LOC111323249 not mapped 8.71 34.3 74.6% feature · violin
gastrodermis_alga_hosting 21 PFX30281.1 (Spis_XP_022782981_1) 4.21 32.6 78.8% feature · violin
gastrodermis_alga_hosting 22 Spis_XP_022789543_1 not mapped 6.78 31.3 68.7% feature · violin
gastrodermis_alga_hosting 23 PFX17402.1 (Spis_XP_022803540_1) 3.48 31.2 82.3% feature · violin
gastrodermis_alga_hosting 24 PFX24943.1 (Spis_XP_022791707_1) 3.98 30.3 74.0% feature · violin
gastrodermis_alga_hosting 25 PFX14641.1 (Spis_XP_022807508_1) 8.43 30.1 65.6% feature · violin
gastrodermis_alga_hosting 26 Spis_XP_022779131_1 not mapped 5.79 29.9 67.0% feature · violin
gastrodermis_alga_hosting 27 PFX28932.1 (Spis_XP_022785146_1) 9.86 29.5 63.8% feature · violin
gastrodermis_alga_hosting 28 Spis_XP_022807230_1 not mapped 3.11 28.3 92.2% feature · violin
gastrodermis_alga_hosting 29 PFX26561.1 (Spis_XP_022789093_1) 6.42 27.8 61.6% feature · violin
gastrodermis_alga_hosting 30 PFX15935.1 (Spis_XP_022805749_1) 6.60 27.0 59.5% feature · violin
gastrodermis_alga_hosting 31 PFX32892.1 (Spis_Spis2158_1) 2.53 26.7 80.5% feature · violin
gastrodermis_alga_hosting 32 PFX26248.1 (Spis_XP_022789606_1) 6.11 25.6 57.0% feature · violin
gastrodermis_alga_hosting 33 PFX32232.1 (Spis_XP_022779557_1) 8.89 25.4 55.1% feature · violin
gastrodermis_alga_hosting 34 PFX16257.1 (Spis_XP_022805241_1) 2.94 25.3 71.0% feature · violin
gastrodermis_alga_hosting 35 Spis_orphan_peak_10797 not mapped 8.42 25.2 54.7% feature · violin
gastrodermis_alga_hosting 36 PFX15192.1 (Spis_XP_022806770_1) 4.80 25.0 57.6% feature · violin
gastrodermis_alga_hosting 37 PFX33667.1 (Spis_XP_022796857_1) 2.63 24.9 77.1% feature · violin
gastrodermis_alga_hosting 38 PFX34038.1 (Spis_XP_022791863_1) 2.19 24.9 81.7% feature · violin
gastrodermis_alga_hosting 39 Spis_LOC111345167 not mapped 2.68 24.6 81.5% feature · violin
gastrodermis_alga_hosting 40 Spis_LOC111327115 not mapped 5.19 24.4 56.3% feature · violin
gastrodermis_alga_hosting 41 PFX34891.1 (Spis_XP_022801320_1) 3.62 24.4 61.6% feature · violin
gastrodermis_alga_hosting 42 PFX28144.1 (Spis_XP_022786369_1) 7.54 24.2 52.8% feature · violin
gastrodermis_alga_hosting 43 PFX30431.1 (Spis_XP_022782649_1) 4.11 24.1 58.0% feature · violin
gastrodermis_alga_hosting 44 PFX28884.1 (Spis_XP_022785263_1) 2.43 24.1 82.3% feature · violin
gastrodermis_alga_hosting 45 PFX34862.1 (Spis_XP_022778014_1) 2.06 24.1 86.2% feature · violin
gastrodermis_alga_hosting 46 PFX18816.1 (Spis_XP_022801310_1) 5.51 23.9 53.5% feature · violin
gastrodermis_alga_hosting 47 Spis_orphan_peak_4181 not mapped 4.15 23.6 56.3% feature · violin
gastrodermis_alga_hosting 48 PFX22979.1 (Spis_XP_022794845_1) 8.81 23.5 51.0% feature · violin
gastrodermis_alga_hosting 49 Spis_YP_002149701_1 not mapped 0.53 23.5 100.0% feature · violin
gastrodermis_alga_hosting 50 PFX25296.1 (Spis_XP_022791168_1) 9.43 23.2 50.3% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 16 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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