Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis4614 epidermis2894 gastrodermis_alga_hosting755 gastrodermis_muscle663 neuron_Isl652 neuron_Atoh8628 calicoblast584 gastrodermis_like_2436 neuron_Pou4_2340 gland_2284 neurosecretory_progenitors232 digestive_filaments214 neuron_Pou4_Otp206 neuron_Pou4_1190 germline_oocytes_1182 neuron_Pou4_Gsx162 immune_3142 neuron_Isl_Nkx6136 immune_1126 gland_1_Xbp121 gland_3117 germline_oocytes_273 immune_455 immune_252 cnidocyte38

Showing the cell type that Spis_XP_022782793_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
gastrodermis_like_2 1 PFX28772.1 (Spis_XP_022785393_1) 5.62 27.8 83.7% feature · violin
gastrodermis_like_2 2 PFX20472.1 (Spis_XP_022798721_1) 3.49 26.9 96.6% feature · violin
gastrodermis_like_2 3 PFX28743.1 (Spis_XP_022785431_1) 4.58 24.7 80.5% feature · violin
gastrodermis_like_2 4 PFX28745.1 (Spis_XP_022785432_1) 4.59 24.5 79.8% feature · violin
gastrodermis_like_2 5 PFX30375.1 (Spis_XP_022782793_1) 4.77 24.4 76.8% feature · violin
gastrodermis_like_2 6 Spis_XP_022783033_1 not mapped 4.38 24.1 77.1% feature · violin
gastrodermis_like_2 7 PFX30374.1 (Spis_XP_022782792_1) 4.78 22.8 70.9% feature · violin
gastrodermis_like_2 8 PFX15742.1 (Spis_XP_022806064_1) 4.16 19.7 62.6% feature · violin
gastrodermis_like_2 9 PFX28779.1 (Spis_XP_022778215_1) 4.42 19.5 60.1% feature · violin
gastrodermis_like_2 10 Spis_LOC111325828 not mapped 3.59 19.4 64.7% feature · violin
gastrodermis_like_2 11 PFX21506.1 (Spis_XP_022797135_1) 2.63 19.4 93.1% feature · violin
gastrodermis_like_2 12 PFX25331.1 (Spis_XP_022791098_1) 3.97 19.1 60.8% feature · violin
gastrodermis_like_2 13 PFX23310.1 (Spis_XP_022794351_1) 3.23 19.0 98.6% feature · violin
gastrodermis_like_2 14 PFX28773.1 (Spis_XP_022785396_1) 4.70 18.8 57.1% feature · violin
gastrodermis_like_2 15 PFX15263.1 (Spis_XP_022806701_1) 6.03 18.6 53.7% feature · violin
gastrodermis_like_2 16 Spis_XP_022785492_1 not mapped 4.37 18.1 56.0% feature · violin
gastrodermis_like_2 17 Spis_LOC111342965 not mapped 2.61 17.8 76.6% feature · violin
gastrodermis_like_2 18 PFX28771.1 (Spis_XP_022785400_1) 4.18 17.8 55.7% feature · violin
gastrodermis_like_2 19 PFX15876.1 (Spis_XP_022805827_1) 2.49 17.4 73.2% feature · violin
gastrodermis_like_2 20 PFX25335.1 (Spis_XP_022791079_1) 2.20 17.2 84.9% feature · violin
gastrodermis_like_2 21 PFX14344.1 (Spis_XP_022807892_1) 2.17 17.2 78.0% feature · violin
gastrodermis_like_2 22 PFX16967.1 (Spis_XP_022804218_1) 2.43 17.1 71.8% feature · violin
gastrodermis_like_2 23 PFX11585.1 (Spis_XP_022778000_1) 4.66 16.6 50.7% feature · violin
gastrodermis_like_2 24 Spis_XP_022793420_1 not mapped 2.36 16.3 91.3% feature · violin
gastrodermis_like_2 25 Spis_orphan_peak_6121 not mapped 1.77 15.8 88.5% feature · violin
gastrodermis_like_2 26 Spis_LOC111338169 not mapped 4.63 15.6 47.5% feature · violin
gastrodermis_like_2 27 PFX32926.1 (Spis_XP_022808627_1) 5.12 15.3 45.4% feature · violin
gastrodermis_like_2 28 PFX17698.1 (Spis_XP_022803099_1) 2.02 15.3 72.9% feature · violin
gastrodermis_like_2 29 PFX25979.1 (Spis_XP_022790068_1) 2.88 15.2 54.4% feature · violin
gastrodermis_like_2 30 PFX33933.1 (Spis_XP_022793074_1) 1.35 14.5 96.3% feature · violin
gastrodermis_like_2 31 PFX18022.1 (Spis_XP_022802592_1) 2.80 14.4 52.3% feature · violin
gastrodermis_like_2 32 PFX14068.1 (Spis_XP_022808261_1) 4.26 14.2 43.3% feature · violin
gastrodermis_like_2 33 PFX12838.1 (Spis_XP_022786790_1) 4.09 14.0 43.8% feature · violin
gastrodermis_like_2 34 PFX28884.1 (Spis_XP_022785263_1) 1.86 14.0 75.9% feature · violin
gastrodermis_like_2 35 PFX21489.1 (Spis_XP_022797194_1) 3.50 13.9 45.0% feature · violin
gastrodermis_like_2 36 PFX28748.1 (Spis_XP_022785448_1) 3.88 13.8 43.6% feature · violin
gastrodermis_like_2 37 PFX18035.1 (Spis_XP_022802583_1) 3.49 13.6 44.7% feature · violin
gastrodermis_like_2 38 PFX16807.1 (Spis_XP_022804433_1) 1.81 13.5 70.4% feature · violin
gastrodermis_like_2 39 PFX27988.1 (Spis_XP_022786665_1) 1.80 13.4 75.0% feature · violin
gastrodermis_like_2 40 PFX28813.1 (Spis_XP_022785287_1) 1.89 13.2 62.6% feature · violin
gastrodermis_like_2 41 PFX23295.1 (Spis_XP_022794417_1) 2.01 12.7 56.4% feature · violin
gastrodermis_like_2 42 PFX31377.1 (Spis_XP_022781072_1) 1.85 12.7 67.4% feature · violin
gastrodermis_like_2 43 PFX28798.1 (Spis_XP_022785498_1) 1.75 12.6 79.4% feature · violin
gastrodermis_like_2 44 PFX32957.1 (Spis_XP_022807459_1) 4.09 12.5 39.0% feature · violin
gastrodermis_like_2 45 Spis_XP_022785430_1 not mapped 3.68 12.5 39.7% feature · violin
gastrodermis_like_2 46 PFX27058.1 (Spis_XP_022788244_1) 1.72 12.2 64.4% feature · violin
gastrodermis_like_2 47 PFX29965.1 (Spis_XP_022783496_1) 4.44 12.2 36.7% feature · violin
gastrodermis_like_2 48 PFX20795.1 (Spis_XP_022799468_1) 3.01 12.2 41.7% feature · violin
gastrodermis_like_2 49 PFX18191.1 (Spis_XP_022802341_1) 2.37 12.1 46.6% feature · violin
gastrodermis_like_2 50 Spis_orphan_peak_4023 not mapped 1.88 11.8 60.1% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 9 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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