Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis4614 epidermis2894 gastrodermis_alga_hosting755 gastrodermis_muscle663 neuron_Isl652 neuron_Atoh8628 calicoblast584 gastrodermis_like_2436 neuron_Pou4_2340 gland_2284 neurosecretory_progenitors232 digestive_filaments214 neuron_Pou4_Otp206 neuron_Pou4_1190 germline_oocytes_1182 neuron_Pou4_Gsx162 immune_3142 neuron_Isl_Nkx6136 immune_1126 gland_1_Xbp121 gland_3117 germline_oocytes_273 immune_455 immune_252 cnidocyte38

Showing the cell type that Spis_XP_022785063_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
epidermis 1 PFX13486.1 (Spis_XP_022809005_1) 4.03 60.5 83.7% feature · violin
epidermis 2 Spis_LOC111330312 not mapped 6.14 56.5 71.5% feature · violin
epidermis 3 Spis_LOC111333052 not mapped 1.30 52.8 99.3% feature · violin
epidermis 4 PFX13487.1 (Spis_XP_022809004_1) 3.53 51.3 74.6% feature · violin
epidermis 5 PFX30728.1 (Spis_XP_022782200_1) 0.75 49.4 100.0% feature · violin
epidermis 6 Spis_LOC111342924 not mapped 5.37 48.7 62.4% feature · violin
epidermis 7 PFX26795.1 (Spis_XP_022788581_1) 2.21 48.0 95.1% feature · violin
epidermis 8 PFX28984.1 (Spis_XP_022785063_1) 4.27 47.4 65.3% feature · violin
epidermis 9 Spis_XP_022777980_1 not mapped 4.26 44.0 60.2% feature · violin
epidermis 10 PFX31400.1 (Spis_XP_022781043_1) 5.48 43.5 54.9% feature · violin
epidermis 11 PFX33650.1 (Spis_XP_022797264_1) 2.99 42.5 65.1% feature · violin
epidermis 12 PFX29889.1 (Spis_XP_022783517_1) 5.64 41.5 52.0% feature · violin
epidermis 13 Spis_LOC111340505 not mapped 1.56 40.5 85.3% feature · violin
epidermis 14 PFX23687.1 (Spis_XP_022793831_1) 3.07 39.0 62.5% feature · violin
epidermis 15 Spis_XP_022789462_1 not mapped 4.91 37.8 49.2% feature · violin
epidermis 16 Spis_XP_022785426_1 not mapped 2.68 37.2 60.1% feature · violin
epidermis 17 Spis_LOC111321250 not mapped 4.85 36.3 46.6% feature · violin
epidermis 18 Spis_orphan_peak_11414 not mapped 3.74 35.6 51.1% feature · violin
epidermis 19 PFX15546.1 (Spis_XP_022806326_1) 3.93 35.6 48.8% feature · violin
epidermis 20 PFX26933.1 (Spis_XP_022788423_1) 1.81 35.3 74.2% feature · violin
epidermis 21 PFX27843.1 (Spis_XP_022786836_1) 1.24 34.5 95.2% feature · violin
epidermis 22 PFX33648.1 (Spis_XP_022797242_1) 5.80 34.3 42.7% feature · violin
epidermis 23 Spis_orphan_peak_15509 not mapped 6.87 34.3 42.2% feature · violin
epidermis 24 Spis_XP_022806836_1 not mapped 6.30 34.1 42.4% feature · violin
epidermis 25 PFX16449.1 (Spis_XP_022782245_1) 4.13 34.0 46.9% feature · violin
epidermis 26 PFX16275.1 (Spis_XP_022805253_1) 5.07 33.8 42.9% feature · violin
epidermis 27 Spis_orphan_peak_1959 not mapped 5.23 33.1 41.9% feature · violin
epidermis 28 PFX22233.1 (Spis_XP_022795998_1) 6.05 32.6 40.7% feature · violin
epidermis 29 PFX33495.1 (Spis_XP_022795459_1) 1.23 31.0 89.5% feature · violin
epidermis 30 Spis_orphan_peak_16613 not mapped 5.10 29.9 38.7% feature · violin
epidermis 31 PFX23400.1 (Spis_XP_022794254_1) 2.24 29.7 54.4% feature · violin
epidermis 32 Spis_LOC111343643 not mapped 5.03 28.3 36.7% feature · violin
epidermis 33 PFX25877.1 (Spis_XP_022790259_1) 1.91 28.1 53.7% feature · violin
epidermis 34 PFX19197.1 (Spis_XP_022800756_1) 5.62 27.7 34.5% feature · violin
epidermis 35 Spis_LOC111340475 not mapped 5.86 27.2 33.8% feature · violin
epidermis 36 Spis_LOC111334585 not mapped 5.19 27.0 34.2% feature · violin
epidermis 37 Spis_XP_022795490_1 not mapped 6.08 26.4 32.7% feature · violin
epidermis 38 Spis_XP_022795472_1 not mapped 0.72 26.0 93.6% feature · violin
epidermis 39 Spis_LOC111325592 not mapped 4.98 25.6 35.0% feature · violin
epidermis 40 PFX19916.1 (Spis_XP_022779869_1) 2.54 25.2 40.6% feature · violin
epidermis 41 PFX29064.1 (Spis_XP_022785027_1) 4.37 25.1 32.7% feature · violin
epidermis 42 PFX33668.1 (Spis_XP_022796837_1) 2.32 25.0 42.4% feature · violin
epidermis 43 PFX20550.1 (Spis_XP_022798647_1) 3.49 24.9 34.7% feature · violin
epidermis 44 PFX17035.1 (Spis_XP_022801108_1) 4.47 24.8 32.3% feature · violin
epidermis 45 PFX24695.1 (Spis_XP_022792089_1) 3.28 24.4 34.8% feature · violin
epidermis 46 PFX12634.1 (Spis_XP_022810030_1) 4.24 24.4 31.8% feature · violin
epidermis 47 PFX31668.1 (Spis_XP_022780625_1) 1.35 22.6 55.1% feature · violin
epidermis 48 Spis_orphan_peak_10184 not mapped 3.57 22.6 31.3% feature · violin
epidermis 49 PFX32409.1 (Spis_XP_022779341_1) 5.10 22.2 27.9% feature · violin
epidermis 50 PFX34105.1 (Spis_XP_022790239_1) 3.25 21.7 31.2% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 20 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

TOP