Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis4614 epidermis2894 gastrodermis_alga_hosting755 gastrodermis_muscle663 neuron_Isl652 neuron_Atoh8628 calicoblast584 gastrodermis_like_2436 neuron_Pou4_2340 gland_2284 neurosecretory_progenitors232 digestive_filaments214 neuron_Pou4_Otp206 neuron_Pou4_1190 germline_oocytes_1182 neuron_Pou4_Gsx162 immune_3142 neuron_Isl_Nkx6136 immune_1126 gland_1_Xbp121 gland_3117 germline_oocytes_273 immune_455 immune_252 cnidocyte38

Showing the cell type that Spis_XP_022791079_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
gastrodermis_muscle 1 PFX21506.1 (Spis_XP_022797135_1) 2.99 27.3 92.5% feature · violin
gastrodermis_muscle 2 Spis_XP_022781963_1 not mapped 2.73 25.1 79.2% feature · violin
gastrodermis_muscle 3 PFX15748.1 (Spis_XP_022806051_1) 3.82 24.4 64.7% feature · violin
gastrodermis_muscle 4 PFX30103.1 (Spis_XP_022783202_1) 3.56 24.2 68.3% feature · violin
gastrodermis_muscle 5 Spis_XP_022803424_1 not mapped 3.59 23.4 63.0% feature · violin
gastrodermis_muscle 6 PFX26357.1 (Spis_XP_022789464_1) 2.73 22.1 70.3% feature · violin
gastrodermis_muscle 7 PFX28419.1 (Spis_XP_022779413_1) 5.03 22.1 54.0% feature · violin
gastrodermis_muscle 8 Spis_XP_022779287_1 not mapped 3.42 21.7 62.7% feature · violin
gastrodermis_muscle 9 Spis_XP_022784238_1 not mapped 2.45 21.3 78.7% feature · violin
gastrodermis_muscle 10 PFX34186.1 (Spis_XP_022789133_1) 5.60 20.9 50.1% feature · violin
gastrodermis_muscle 11 Spis_XP_022779335_1 not mapped 2.53 20.8 68.6% feature · violin
gastrodermis_muscle 12 Spis_XP_022807230_1 not mapped 2.47 20.5 89.6% feature · violin
gastrodermis_muscle 13 PFX25335.1 (Spis_XP_022791079_1) 2.17 20.5 79.3% feature · violin
gastrodermis_muscle 14 PFX33880.1 (Spis_XP_022793571_1) 2.66 20.2 65.9% feature · violin
gastrodermis_muscle 15 PFX31233.1 (Spis_XP_022781315_1) 2.17 19.8 76.9% feature · violin
gastrodermis_muscle 16 Spis_XP_022777980_1 not mapped 3.10 19.7 60.0% feature · violin
gastrodermis_muscle 17 PFX18709.1 (Spis_XP_022801454_1) 2.78 19.6 59.9% feature · violin
gastrodermis_muscle 18 Spis_XP_022786676_1 not mapped 2.98 19.5 87.6% feature · violin
gastrodermis_muscle 19 Spis_XP_022793420_1 not mapped 2.32 19.5 88.1% feature · violin
gastrodermis_muscle 20 PFX23310.1 (Spis_XP_022794351_1) 2.73 19.1 96.2% feature · violin
gastrodermis_muscle 21 Spis_XP_022796887_1 not mapped 1.97 19.1 90.8% feature · violin
gastrodermis_muscle 22 PFX19292.1 (Spis_XP_022800614_1) 2.16 18.3 65.5% feature · violin
gastrodermis_muscle 23 PFX27988.1 (Spis_XP_022786665_1) 2.02 18.2 76.2% feature · violin
gastrodermis_muscle 24 Spis_LOC111321177 not mapped 1.82 17.3 80.8% feature · violin
gastrodermis_muscle 25 Spis_XP_022803549_1 not mapped 2.26 17.1 58.8% feature · violin
gastrodermis_muscle 26 PFX28912.1 (Spis_XP_022785129_1) 2.60 17.0 55.8% feature · violin
gastrodermis_muscle 27 PFX20901.1 (Spis_XP_022798118_1) 2.31 16.9 56.4% feature · violin
gastrodermis_muscle 28 PFX31442.1 (Spis_XP_022780951_1) 1.93 16.3 62.6% feature · violin
gastrodermis_muscle 29 PFX34286.1 (Spis_XP_022787830_1) 2.25 16.1 54.8% feature · violin
gastrodermis_muscle 30 Spis_XP_022779255_1 not mapped 2.31 15.8 52.0% feature · violin
gastrodermis_muscle 31 PFX34434.1 (Spis_XP_022783839_1) 2.04 15.7 58.4% feature · violin
gastrodermis_muscle 32 PFX28798.1 (Spis_XP_022785498_1) 1.76 15.5 75.7% feature · violin
gastrodermis_muscle 33 PFX33500.1 (Spis_XP_022800031_1) 2.31 15.3 51.0% feature · violin
gastrodermis_muscle 34 Spis_XP_022779176_1 not mapped 2.50 15.2 47.1% feature · violin
gastrodermis_muscle 35 Spis_orphan_peak_6856 not mapped 1.34 15.1 87.5% feature · violin
gastrodermis_muscle 36 PFX30820.1 (Spis_XP_022782117_1) 1.92 15.0 56.7% feature · violin
gastrodermis_muscle 37 PFX17237.1 (Spis_XP_022803796_1) 2.13 14.5 51.1% feature · violin
gastrodermis_muscle 38 PFX34105.1 (Spis_XP_022790239_1) 2.88 14.4 42.4% feature · violin
gastrodermis_muscle 39 Spis_XP_022809885_1 not mapped 1.79 14.2 65.0% feature · violin
gastrodermis_muscle 40 PFX30266.1 (Spis_Spis4939_1) 1.56 14.2 74.1% feature · violin
gastrodermis_muscle 41 PFX31111.1 (Spis_XP_022781553_1) 2.56 14.2 43.7% feature · violin
gastrodermis_muscle 42 PFX32450.1 (Spis_XP_022779295_1) 2.49 14.1 43.4% feature · violin
gastrodermis_muscle 43 PFX34309.1 (Spis_XP_022777939_1) 1.82 13.6 55.2% feature · violin
gastrodermis_muscle 44 Spis_orphan_peak_17555 not mapped 1.07 13.6 99.4% feature · violin
gastrodermis_muscle 45 PFX33805.1 (Spis_XP_022794071_1) 1.41 13.4 70.9% feature · violin
gastrodermis_muscle 46 PFX33112.1 (Spis_XP_022807192_1) 1.89 13.3 63.7% feature · violin
gastrodermis_muscle 47 PFX15525.1 (Spis_XP_022806356_1) 1.77 13.0 51.9% feature · violin
gastrodermis_muscle 48 PFX31116.1 (Spis_XP_022781500_1) 4.00 13.0 32.9% feature · violin
gastrodermis_muscle 49 Spis_XP_022808932_1 not mapped 2.16 13.0 43.3% feature · violin
gastrodermis_muscle 50 PFX24912.1 (Spis_XP_022791794_1) 2.06 13.0 54.3% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 18 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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