Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that Spis_XP_022793511_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
neuron_Pou4_Otp 1 Spis_orphan_peak_881 not mapped 5.95 16.8 72.3% feature · violin
neuron_Pou4_Otp 2 PFX28767.1 (Spis_XP_022785429_1) 5.40 16.7 71.8% feature · violin
neuron_Pou4_Otp 3 PFX27369.1 (Spis_XP_022787668_1) 8.48 15.2 62.1% feature · violin
neuron_Pou4_Otp 4 PFX20388.1 (Spis_XP_022798873_1) 6.91 15.0 62.1% feature · violin
neuron_Pou4_Otp 5 Spis_XP_022801297_1 not mapped 4.00 14.6 68.0% feature · violin
neuron_Pou4_Otp 6 PFX16393.1 (Spis_XP_022805062_1) 4.60 12.0 52.9% feature · violin
neuron_Pou4_Otp 7 PFX23914.1 (Spis_XP_022793409_1) 5.87 11.8 49.5% feature · violin
neuron_Pou4_Otp 8 PFX15100.1 (Spis_XP_022785645_1) 4.76 11.7 51.5% feature · violin
neuron_Pou4_Otp 9 PFX27760.1 (Spis_XP_022787020_1) 4.66 11.6 50.5% feature · violin
neuron_Pou4_Otp 10 PFX19362.1 (Spis_XP_022800472_1) 5.16 11.5 49.0% feature · violin
neuron_Pou4_Otp 11 PFX23869.1 (Spis_XP_022793511_1) 4.81 11.3 49.0% feature · violin
neuron_Pou4_Otp 12 Spis_LOC111322283 not mapped 7.67 11.3 46.6% feature · violin
neuron_Pou4_Otp 13 PFX26950.1 (Spis_XP_022788369_1) 4.67 11.2 49.0% feature · violin
neuron_Pou4_Otp 14 PFX31786.1 (Spis_XP_022780388_1) 4.15 11.2 50.5% feature · violin
neuron_Pou4_Otp 15 PFX34774.1 (Spis_XP_022779877_1) 4.60 11.0 48.1% feature · violin
neuron_Pou4_Otp 16 Spis_XP_022798876_1 not mapped 7.36 10.9 44.7% feature · violin
neuron_Pou4_Otp 17 PFX12203.1 (Spis_XP_022810577_1) 3.86 10.9 50.0% feature · violin
neuron_Pou4_Otp 18 PFX28304.1 (Spis_XP_022786197_1) 3.53 10.7 51.9% feature · violin
neuron_Pou4_Otp 19 PFX31547.1 (Spis_XP_022780698_1) 5.31 10.7 45.6% feature · violin
neuron_Pou4_Otp 20 PFX17520.1 (Spis_XP_022803360_1) 4.06 10.6 48.1% feature · violin
neuron_Pou4_Otp 21 Spis_XP_022810272_1 not mapped 4.40 10.5 46.6% feature · violin
neuron_Pou4_Otp 22 PFX34763.1 (Spis_XP_022780474_1) 3.74 10.4 48.1% feature · violin
neuron_Pou4_Otp 23 PFX20232.1 (Spis_XP_022799112_1) 5.32 10.2 43.2% feature · violin
neuron_Pou4_Otp 24 PFX20699.1 (Spis_XP_022798407_1) 4.61 9.8 42.7% feature · violin
neuron_Pou4_Otp 25 Spis_LOC111332881 not mapped 6.71 9.7 39.8% feature · violin
neuron_Pou4_Otp 26 Spis_XP_022778925_1 not mapped 6.36 9.5 39.3% feature · violin
neuron_Pou4_Otp 27 PFX34211.1 (Spis_XP_022786579_1) 4.42 9.0 39.3% feature · violin
neuron_Pou4_Otp 28 PFX17144.1 (Spis_XP_022803962_1) 8.47 8.9 36.4% feature · violin
neuron_Pou4_Otp 29 PFX32685.1 (Spis_XP_022778848_1) 4.79 8.9 38.3% feature · violin
neuron_Pou4_Otp 30 PFX17139.1 (Spis_XP_022803955_1) 5.01 8.9 37.9% feature · violin
neuron_Pou4_Otp 31 PFX17402.1 (Spis_XP_022803540_1) 2.04 8.8 58.3% feature · violin
neuron_Pou4_Otp 32 PFX31235.1 (Spis_XP_022781270_1) 3.81 8.8 40.8% feature · violin
neuron_Pou4_Otp 33 Spis_LOC111328637 not mapped 4.35 8.7 38.3% feature · violin
neuron_Pou4_Otp 34 PFX32445.1 (Spis_Spis2727_1) 6.22 8.7 36.4% feature · violin
neuron_Pou4_Otp 35 PFX31351.1 (Spis_XP_022781105_1) 4.68 8.5 36.9% feature · violin
neuron_Pou4_Otp 36 PFX23011.1 (Spis_XP_022794830_1) 3.05 8.4 43.2% feature · violin
neuron_Pou4_Otp 37 PFX23857.1 (Spis_XP_022793474_1) 2.07 8.4 53.4% feature · violin
neuron_Pou4_Otp 38 PFX15814.1 (Spis_XP_022805937_1) 2.18 8.4 51.0% feature · violin
neuron_Pou4_Otp 39 PFX32880.1 (Spis_XP_022809985_1) 3.41 8.4 39.8% feature · violin
neuron_Pou4_Otp 40 PFX27955.1 (Spis_XP_022786729_1) 5.78 8.4 35.0% feature · violin
neuron_Pou4_Otp 41 PFX16031.1 (Spis_XP_022805587_1) 5.31 8.4 35.4% feature · violin
neuron_Pou4_Otp 42 Spis_XP_022809550_1 not mapped 3.46 8.3 39.3% feature · violin
neuron_Pou4_Otp 43 PFX30861.1 (Spis_XP_022781966_1) 6.10 8.3 34.5% feature · violin
neuron_Pou4_Otp 44 Spis_LOC111332037 not mapped 7.60 8.3 34.5% feature · violin
neuron_Pou4_Otp 45 PFX19649.1 (Spis_XP_022777736_1) 2.93 8.2 43.2% feature · violin
neuron_Pou4_Otp 46 PFX31749.1 (Spis_XP_022780538_1) 6.23 8.1 35.0% feature · violin
neuron_Pou4_Otp 47 PFX30876.1 (Spis_XP_022781951_1) 4.50 8.1 35.4% feature · violin
neuron_Pou4_Otp 48 PFX19791.1 (Spis_XP_022799830_1) 5.66 8.1 34.0% feature · violin
neuron_Pou4_Otp 49 PFX32838.1 (Spis_XP_022810126_1) 3.57 8.0 37.4% feature · violin
neuron_Pou4_Otp 50 PFX23345.1 (Spis_XP_022794306_1) 3.58 7.9 36.9% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 10 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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