Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis4614 epidermis2894 gastrodermis_alga_hosting755 gastrodermis_muscle663 neuron_Isl652 neuron_Atoh8628 calicoblast584 gastrodermis_like_2436 neuron_Pou4_2340 gland_2284 neurosecretory_progenitors232 digestive_filaments214 neuron_Pou4_Otp206 neuron_Pou4_1190 germline_oocytes_1182 neuron_Pou4_Gsx162 immune_3142 neuron_Isl_Nkx6136 immune_1126 gland_1_Xbp121 gland_3117 germline_oocytes_273 immune_455 immune_252 cnidocyte38

Showing the cell type that Spis_XP_022795855_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
immune_4 1 PFX18980.1 (Spis_XP_022801064_1) 13.52 12.8 100.0% feature · violin
immune_4 2 PFX18973.1 (Spis_XP_022801053_1) 13.86 12.6 98.2% feature · violin
immune_4 3 PFX22315.1 (Spis_XP_022795842_1) 14.28 12.6 98.2% feature · violin
immune_4 4 PFX18974.1 (Spis_XP_022801045_1) 12.84 12.3 96.4% feature · violin
immune_4 5 PFX30600.1 (Spis_Spis4552_1) 11.73 11.6 90.9% feature · violin
immune_4 6 PFX22314.1 (Spis_XP_022795855_1) 13.89 11.6 90.9% feature · violin
immune_4 7 PFX29860.1 (Spis_XP_022783628_1) 10.41 11.6 90.9% feature · violin
immune_4 8 PFX17827.1 (Spis_XP_022802904_1) 7.12 11.5 90.9% feature · violin
immune_4 9 PFX34366.1 (Spis_Spis21300_1) 10.05 11.4 89.1% feature · violin
immune_4 10 PFX17797.1 (Spis_XP_022802946_1) 8.88 11.3 89.1% feature · violin
immune_4 11 PFX15112.1 (Spis_XP_022806885_1) 7.56 11.3 89.1% feature · violin
immune_4 12 PFX21708.1 (Spis_XP_022796771_1) 7.17 11.0 87.3% feature · violin
immune_4 13 PFX28679.1 (Spis_Spis6626_1) 7.05 10.8 85.5% feature · violin
immune_4 14 PFX32764.1 (Spis_XP_022778158_1) 12.73 10.5 81.8% feature · violin
immune_4 15 PFX19527.1 (Spis_XP_022800233_1) 3.18 10.2 92.7% feature · violin
immune_4 16 Spis_orphan_peak_3804 not mapped 9.66 10.0 78.2% feature · violin
immune_4 17 PFX32589.1 (Spis_XP_022779048_1) 9.04 10.0 78.2% feature · violin
immune_4 18 PFX30718.1 (Spis_XP_022782222_1) 7.91 9.9 78.2% feature · violin
immune_4 19 PFX29326.1 (Spis_XP_022784520_1) 10.58 9.8 76.4% feature · violin
immune_4 20 PFX24392.1 (Spis_XP_022792639_1) 8.46 9.7 76.4% feature · violin
immune_4 21 Spis_orphan_peak_3385 not mapped 9.39 9.5 74.5% feature · violin
immune_4 22 Spis_orphan_peak_3225 not mapped 10.73 9.3 72.7% feature · violin
immune_4 23 PFX20260.1 (Spis_XP_022799073_1) 11.46 9.3 72.7% feature · violin
immune_4 24 PFX15973.1 (Spis_XP_022805692_1) 4.79 9.2 78.2% feature · violin
immune_4 25 PFX23379.1 (Spis_XP_022794272_1) 4.56 9.1 78.2% feature · violin
immune_4 26 Spis_LOC111324307 not mapped 15.26 8.9 69.1% feature · violin
immune_4 27 PFX23887.1 (Spis_XP_022793436_1) 4.68 8.8 74.5% feature · violin
immune_4 28 Spis_LOC111339093 not mapped 4.39 8.6 83.6% feature · violin
immune_4 29 PFX18251.1 (Spis_XP_022802268_1) 11.31 8.4 65.5% feature · violin
immune_4 30 PFX12262.1 (Spis_Spis23808_1) 9.44 8.4 65.5% feature · violin
immune_4 31 PFX15304.1 (Spis_XP_022806627_1) 3.02 8.0 81.8% feature · violin
immune_4 32 Spis_orphan_peak_4739 not mapped 11.43 7.9 61.8% feature · violin
immune_4 33 PFX32879.1 (Spis_XP_022809997_1) 2.88 7.9 78.2% feature · violin
immune_4 34 PFX34906.1 (Spis_XP_022789434_1) 4.16 7.5 65.5% feature · violin
immune_4 35 PFX30164.1 (Spis_XP_022783044_1) 6.22 7.3 58.2% feature · violin
immune_4 36 PFX24982.1 (Spis_XP_022791712_1) 6.13 7.2 58.2% feature · violin
immune_4 37 PFX31484.1 (Spis_XP_022780890_1) 4.77 7.2 60.0% feature · violin
immune_4 38 PFX23162.1 (Spis_XP_022794566_1) 2.35 6.9 80.0% feature · violin
immune_4 39 Spis_orphan_peak_4595 not mapped 11.35 6.8 52.7% feature · violin
immune_4 40 PFX12294.1 (Spis_XP_022788614_1) 4.65 6.7 56.4% feature · violin
immune_4 41 PFX21928.1 (Spis_XP_022796444_1) 3.23 6.7 63.6% feature · violin
immune_4 42 PFX19362.1 (Spis_XP_022800472_1) 4.56 6.7 56.4% feature · violin
immune_4 43 Spis_XP_022779650_1 not mapped 3.15 6.6 63.6% feature · violin
immune_4 44 PFX15741.1 (Spis_XP_022806069_1) 3.18 6.6 63.6% feature · violin
immune_4 45 PFX18725.1 (Spis_XP_022801441_1) 5.68 6.5 52.7% feature · violin
immune_4 46 PFX26288.1 (Spis_XP_022789587_1) 1.61 6.5 89.1% feature · violin
immune_4 47 PFX33103.1 (Spis_XP_022805781_1) 2.09 6.4 78.2% feature · violin
immune_4 48 PFX24522.1 (Spis_XP_022782076_1) 2.42 6.4 74.5% feature · violin
immune_4 49 Spis_orphan_peak_21454 not mapped 3.50 6.3 58.2% feature · violin
immune_4 50 PFX27462.1 (Spis_XP_022787469_1) 10.22 6.3 49.1% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 9 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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