Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis4614 epidermis2894 gastrodermis_alga_hosting755 gastrodermis_muscle663 neuron_Isl652 neuron_Atoh8628 calicoblast584 gastrodermis_like_2436 neuron_Pou4_2340 gland_2284 neurosecretory_progenitors232 digestive_filaments214 neuron_Pou4_Otp206 neuron_Pou4_1190 germline_oocytes_1182 neuron_Pou4_Gsx162 immune_3142 neuron_Isl_Nkx6136 immune_1126 gland_1_Xbp121 gland_3117 germline_oocytes_273 immune_455 immune_252 cnidocyte38

Showing the cell type that Spis_XP_022795995_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
immune_1 1 PFX26924.1 (Spis_XP_022788470_1) 12.82 16.4 84.9% feature · violin
immune_1 2 PFX25177.1 (Spis_XP_022791342_1) 12.26 16.1 83.3% feature · violin
immune_1 3 PFX23620.1 (Spis_XP_022793878_1) 10.46 15.2 78.6% feature · violin
immune_1 4 PFX21746.1 (Spis_XP_022796710_1) 10.45 14.2 73.8% feature · violin
immune_1 5 PFX33805.1 (Spis_XP_022794071_1) 3.19 13.3 84.9% feature · violin
immune_1 6 PFX15741.1 (Spis_XP_022806069_1) 4.87 13.2 73.0% feature · violin
immune_1 7 PFX22245.1 (Spis_XP_022795995_1) 11.98 12.7 65.9% feature · violin
immune_1 8 PFX29915.1 (Spis_XP_022783421_1) 2.96 12.3 84.1% feature · violin
immune_1 9 Spis_orphan_peak_7355 not mapped 1.87 10.4 81.7% feature · violin
immune_1 10 PFX14477.1 (Spis_XP_022807720_1) 9.20 10.3 53.2% feature · violin
immune_1 11 Spis_orphan_peak_15281 not mapped 4.53 10.0 56.3% feature · violin
immune_1 12 Spis_XP_022809737_1 not mapped 1.10 9.8 99.2% feature · violin
immune_1 13 Spis_orphan_peak_15284 not mapped 4.53 9.6 54.0% feature · violin
immune_1 14 PFX17797.1 (Spis_XP_022802946_1) 7.33 9.6 50.0% feature · violin
immune_1 15 PFX16916.1 (Spis_XP_022804280_1) 1.41 9.0 82.5% feature · violin
immune_1 16 PFX25609.1 (Spis_XP_022790668_1) 0.92 8.3 96.0% feature · violin
immune_1 17 Spis_orphan_peak_3385 not mapped 6.73 8.3 43.7% feature · violin
immune_1 18 PFX17887.1 (Spis_XP_022802777_1) 2.69 8.2 55.6% feature · violin
immune_1 19 PFX19760.1 (Spis_XP_022799860_1) 0.86 8.0 94.4% feature · violin
immune_1 20 PFX26601.1 (Spis_XP_022789013_1) 3.84 8.0 47.6% feature · violin
immune_1 21 PFX27936.1 (Spis_XP_022786673_1) 11.23 7.8 40.5% feature · violin
immune_1 22 PFX17461.1 (Spis_XP_022803475_1) 5.87 7.8 41.3% feature · violin
immune_1 23 PFX27666.1 (Spis_XP_022787216_1) 4.48 7.7 43.7% feature · violin
immune_1 24 PFX22333.1 (Spis_XP_022795841_1) 0.83 7.7 93.7% feature · violin
immune_1 25 PFX23609.1 (Spis_XP_022793902_1) 7.28 7.4 38.9% feature · violin
immune_1 26 Spis_orphan_peak_13282 not mapped 6.70 7.4 38.9% feature · violin
immune_1 27 Spis_orphan_peak_17269 not mapped 6.43 7.4 38.9% feature · violin
immune_1 28 PFX30483.1 (Spis_XP_022782516_1) 6.75 7.3 38.1% feature · violin
immune_1 29 PFX22292.1 (Spis_XP_022795875_1) 0.71 7.2 88.9% feature · violin
immune_1 30 PFX29347.1 (Spis_XP_022784451_1) 0.73 7.2 93.7% feature · violin
immune_1 31 PFX19335.1 (Spis_XP_022800559_1) 1.76 7.2 60.3% feature · violin
immune_1 32 PFX18409.1 (Spis_XP_022796182_1) 7.66 7.0 36.5% feature · violin
immune_1 33 Spis_XP_022780418_1 not mapped 0.71 7.0 89.7% feature · violin
immune_1 34 PFX20302.1 (Spis_XP_022799019_1) 1.59 7.0 62.7% feature · violin
immune_1 35 PFX27912.1 (Spis_XP_022786812_1) 10.79 6.9 35.7% feature · violin
immune_1 36 PFX33642.1 (Spis_XP_022797980_1) 3.00 6.8 44.4% feature · violin
immune_1 37 PFX33179.1 (Spis_XP_022803823_1) 0.78 6.7 91.3% feature · violin
immune_1 38 PFX26729.1 (Spis_XP_022788785_1) 0.95 6.7 79.4% feature · violin
immune_1 39 PFX14097.1 (Spis_XP_022808232_1) 0.68 6.5 84.1% feature · violin
immune_1 40 PFX23914.1 (Spis_XP_022793409_1) 4.62 6.5 35.7% feature · violin
immune_1 41 PFX14950.1 (Spis_XP_022807111_1) 3.46 6.4 38.9% feature · violin
immune_1 42 PFX14301.1 (Spis_XP_022807950_1) 10.20 6.3 32.5% feature · violin
immune_1 43 PFX26597.1 (Spis_XP_022788977_1) 2.92 6.3 41.3% feature · violin
immune_1 44 PFX28119.1 (Spis_XP_022786448_1) 0.67 6.2 80.2% feature · violin
immune_1 45 PFX20142.1 (Spis_XP_022810214_1) 8.08 6.1 31.7% feature · violin
immune_1 46 Spis_XP_022799130_1 not mapped 3.95 6.1 34.9% feature · violin
immune_1 47 PFX22217.1 (Spis_XP_022795971_1) 0.72 6.0 77.8% feature · violin
immune_1 48 Spis_XP_022789645_1 not mapped 0.59 6.0 86.5% feature · violin
immune_1 49 PFX26943.1 (Spis_XP_022788440_1) 0.64 5.8 82.5% feature · violin
immune_1 50 PFX32286.1 (Spis_XP_022779513_1) 3.88 5.8 33.3% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 10 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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