Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that Spis_XP_022799060_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
calicoblast 1 Spis_XP_022803870_1 not mapped 10.51 32.6 79.6% feature · violin
calicoblast 2 Spis_XP_022796494_1 not mapped 8.31 32.5 80.5% feature · violin
calicoblast 3 Spis_orphan_peak_10292 not mapped 1.12 29.8 100.0% feature · violin
calicoblast 4 PFX29916.1 (Spis_XP_022783415_1) 9.64 29.3 71.7% feature · violin
calicoblast 5 Spis_XP_022806382_1 not mapped 9.71 28.5 69.9% feature · violin
calicoblast 6 Spis_orphan_peak_10291 not mapped 0.83 27.8 100.0% feature · violin
calicoblast 7 Spis_orphan_peak_20616 not mapped 1.38 26.3 99.0% feature · violin
calicoblast 8 PFX33520.1 (Spis_XP_022799082_1) 8.96 26.1 64.0% feature · violin
calicoblast 9 Spis_orphan_peak_14667 not mapped 7.69 25.9 64.0% feature · violin
calicoblast 10 Spis_orphan_peak_19651 not mapped 1.22 25.4 99.5% feature · violin
calicoblast 11 Spis_orphan_peak_9058 not mapped 1.33 25.3 99.7% feature · violin
calicoblast 12 Spis_orphan_peak_5442 not mapped 1.06 24.7 99.7% feature · violin
calicoblast 13 Spis_orphan_peak_12733 not mapped 7.41 23.8 58.9% feature · violin
calicoblast 14 PFX23687.1 (Spis_XP_022793831_1) 3.51 23.4 72.8% feature · violin
calicoblast 15 PFX20266.1 (Spis_XP_022799060_1) 7.24 23.3 57.5% feature · violin
calicoblast 16 PFX14551.1 (Spis_XP_022807628_1) 7.47 22.8 56.3% feature · violin
calicoblast 17 Spis_orphan_peak_1 not mapped 0.69 22.5 100.0% feature · violin
calicoblast 18 PFX21043.1 (Spis_XP_022797906_1) 7.17 22.2 55.0% feature · violin
calicoblast 19 PFX18950.1 (Spis_XP_022801136_1) 9.08 22.2 54.3% feature · violin
calicoblast 20 PFX24085.1 (Spis_XP_022793177_1) 3.66 22.1 63.7% feature · violin
calicoblast 21 PFX29921.1 (Spis_XP_022783501_1) 4.16 21.0 57.2% feature · violin
calicoblast 22 Spis_orphan_peak_3340 not mapped 8.40 20.9 51.2% feature · violin
calicoblast 23 PFX26720.1 (Spis_XP_022788808_1) 8.30 20.1 49.3% feature · violin
calicoblast 24 PFX34594.1 (Spis_XP_022783323_1) 9.16 19.9 48.6% feature · violin
calicoblast 25 PFX30132.1 (Spis_XP_022783223_1) 4.93 19.8 51.2% feature · violin
calicoblast 26 PFX27699.1 (Spis_XP_022787092_1) 7.49 19.4 47.9% feature · violin
calicoblast 27 Spis_LOC111326826 not mapped 6.42 19.3 48.1% feature · violin
calicoblast 28 Spis_orphan_peak_12678 not mapped 8.19 19.3 47.4% feature · violin
calicoblast 29 PFX27030.1 (Spis_XP_022788233_1) 4.40 19.2 51.2% feature · violin
calicoblast 30 PFX23248.1 (Spis_XP_022794431_1) 7.32 19.0 46.9% feature · violin
calicoblast 31 PFX29038.1 (Spis_XP_022784982_1) 8.80 18.7 45.9% feature · violin
calicoblast 32 PFX14959.1 (Spis_XP_022807096_1) 8.75 18.5 45.4% feature · violin
calicoblast 33 PFX26220.1 (Spis_XP_022789665_1) 7.36 18.3 45.2% feature · violin
calicoblast 34 PFX28984.1 (Spis_XP_022785063_1) 2.63 17.4 62.2% feature · violin
calicoblast 35 PFX27659.1 (Spis_XP_022787133_1) 5.20 17.3 44.3% feature · violin
calicoblast 36 Spis_LOC111327222 not mapped 7.81 17.0 41.8% feature · violin
calicoblast 37 PFX25122.1 (Spis_XP_022791446_1) 5.07 17.0 43.5% feature · violin
calicoblast 38 PFX24188.1 (Spis_XP_022792926_1) 3.87 16.9 46.6% feature · violin
calicoblast 39 PFX17021.1 (Spis_XP_022804160_1) 3.70 16.4 45.5% feature · violin
calicoblast 40 PFX31444.1 (Spis_XP_022780954_1) 4.00 16.4 44.5% feature · violin
calicoblast 41 PFX15546.1 (Spis_XP_022806326_1) 2.71 16.2 54.1% feature · violin
calicoblast 42 PFX31441.1 (Spis_XP_022780905_1) 1.84 15.7 69.0% feature · violin
calicoblast 43 PFX29513.1 (Spis_XP_022784146_1) 7.96 15.6 38.4% feature · violin
calicoblast 44 PFX20588.1 (Spis_XP_022798574_1) 2.17 15.1 56.5% feature · violin
calicoblast 45 Spis_XP_022779168_1 not mapped 6.21 15.0 37.3% feature · violin
calicoblast 46 PFX16180.1 (Spis_XP_022805385_1) 4.26 14.9 39.4% feature · violin
calicoblast 47 PFX20365.1 (Spis_XP_022798909_1) 7.10 14.8 36.6% feature · violin
calicoblast 48 PFX17317.1 (Spis_XP_022803680_1) 2.36 14.5 50.0% feature · violin
calicoblast 49 PFX19619.1 (Spis_XP_022800056_1) 2.83 14.4 44.5% feature · violin
calicoblast 50 PFX17191.1 (Spis_XP_022803859_1) 3.06 14.2 43.0% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 17 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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