Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Showing the cell type that Spis_XP_022801713_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
neuron_Pou4_1 1 PFX34216.1 (Spis_XP_022786096_1) 5.77 19.8 88.4% feature · violin
neuron_Pou4_1 2 PFX26795.1 (Spis_XP_022788581_1) 2.71 16.5 98.4% feature · violin
neuron_Pou4_1 3 Spis_orphan_peak_881 not mapped 6.03 15.5 68.9% feature · violin
neuron_Pou4_1 4 PFX30862.1 (Spis_XP_022781968_1) 6.47 14.5 62.6% feature · violin
neuron_Pou4_1 5 PFX29234.1 (Spis_XP_022784645_1) 8.11 14.2 60.5% feature · violin
neuron_Pou4_1 6 PFX16853.1 (Spis_XP_022804348_1) 9.30 13.6 57.4% feature · violin
neuron_Pou4_1 7 PFX34421.1 (Spis_XP_022785026_1) 6.00 13.5 58.9% feature · violin
neuron_Pou4_1 8 Spis_LOC111324957 not mapped 1.86 13.4 88.4% feature · violin
neuron_Pou4_1 9 PFX32317.1 (Spis_XP_022779652_1) 8.38 12.8 54.2% feature · violin
neuron_Pou4_1 10 PFX23935.1 (Spis_XP_022793389_1) 5.48 12.7 56.3% feature · violin
neuron_Pou4_1 11 PFX18578.1 (Spis_XP_022801713_1) 8.61 12.4 52.6% feature · violin
neuron_Pou4_1 12 PFX23356.1 (Spis_XP_022794301_1) 8.11 11.5 48.9% feature · violin
neuron_Pou4_1 13 PFX22938.1 (Spis_XP_022794929_1) 6.34 10.7 46.3% feature · violin
neuron_Pou4_1 14 Spis_LOC111335518 not mapped 7.90 10.6 45.3% feature · violin
neuron_Pou4_1 15 PFX16918.1 (Spis_XP_022804302_1) 6.53 10.6 45.8% feature · violin
neuron_Pou4_1 16 PFX26345.1 (Spis_Spis8989_1) 7.64 10.5 44.7% feature · violin
neuron_Pou4_1 17 PFX19785.1 (Spis_XP_022799818_1) 5.79 10.5 45.8% feature · violin
neuron_Pou4_1 18 PFX19515.1 (Spis_XP_022800251_1) 8.74 10.4 44.2% feature · violin
neuron_Pou4_1 19 PFX31255.1 (Spis_XP_022781288_1) 4.60 10.4 47.4% feature · violin
neuron_Pou4_1 20 Spis_XP_022794323_1 not mapped 8.24 10.0 42.6% feature · violin
neuron_Pou4_1 21 PFX33524.1 (Spis_XP_022799159_1) 6.41 10.0 43.2% feature · violin
neuron_Pou4_1 22 PFX15814.1 (Spis_XP_022805937_1) 2.74 9.3 52.1% feature · violin
neuron_Pou4_1 23 PFX28525.1 (Spis_XP_022785811_1) 6.10 9.1 39.5% feature · violin
neuron_Pou4_1 24 PFX24419.1 (Spis_XP_022792585_1) 4.65 9.1 41.1% feature · violin
neuron_Pou4_1 25 PFX23549.1 (Spis_XP_022794014_1) 5.18 9.0 40.0% feature · violin
neuron_Pou4_1 26 PFX23361.1 (Spis_XP_022794303_1) 9.70 9.0 37.9% feature · violin
neuron_Pou4_1 27 Spis_XP_022790914_1 not mapped 6.34 8.9 38.4% feature · violin
neuron_Pou4_1 28 Spis_YP_002149701_1 not mapped 0.41 8.8 100.0% feature · violin
neuron_Pou4_1 29 PFX29037.1 (Spis_XP_022784944_1) 3.83 8.7 41.6% feature · violin
neuron_Pou4_1 30 PFX34523.1 (Spis_XP_022781643_1) 6.69 8.6 36.8% feature · violin
neuron_Pou4_1 31 PFX29105.1 (Spis_XP_022784864_1) 7.80 8.5 36.3% feature · violin
neuron_Pou4_1 32 PFX32314.1 (Spis_XP_022779603_1) 6.96 8.5 36.3% feature · violin
neuron_Pou4_1 33 PFX16899.1 (Spis_XP_022804315_1) 7.89 8.4 35.8% feature · violin
neuron_Pou4_1 34 PFX32838.1 (Spis_XP_022810126_1) 4.01 8.4 39.5% feature · violin
neuron_Pou4_1 35 PFX22501.1 (Spis_XP_022795564_1) 5.66 8.3 36.3% feature · violin
neuron_Pou4_1 36 PFX29873.1 (Spis_XP_022783557_1) 5.86 8.2 35.8% feature · violin
neuron_Pou4_1 37 PFX29233.1 (Spis_XP_022784652_1) 6.80 8.2 35.3% feature · violin
neuron_Pou4_1 38 Spis_XP_022810272_1 not mapped 4.06 8.1 37.9% feature · violin
neuron_Pou4_1 39 PFX23441.1 (Spis_XP_022794178_1) 8.45 8.1 34.2% feature · violin
neuron_Pou4_1 40 PFX23353.1 (Spis_XP_022794326_1) 7.31 8.0 34.2% feature · violin
neuron_Pou4_1 41 PFX25007.1 (Spis_XP_022791653_1) 4.82 8.0 35.8% feature · violin
neuron_Pou4_1 42 PFX31351.1 (Spis_XP_022781105_1) 4.79 8.0 35.8% feature · violin
neuron_Pou4_1 43 PFX23857.1 (Spis_XP_022793474_1) 2.22 8.0 49.5% feature · violin
neuron_Pou4_1 44 Spis_XP_022800401_1 not mapped 5.51 7.9 34.7% feature · violin
neuron_Pou4_1 45 PFX17719.1 (Spis_XP_022803051_1) 4.16 7.8 36.3% feature · violin
neuron_Pou4_1 46 PFX18590.1 (Spis_XP_022801665_1) 6.63 7.7 33.2% feature · violin
neuron_Pou4_1 47 PFX20232.1 (Spis_XP_022799112_1) 4.79 7.6 34.2% feature · violin
neuron_Pou4_1 48 PFX22878.1 (Spis_XP_022795029_1) 7.82 7.6 32.1% feature · violin
neuron_Pou4_1 49 PFX28174.1 (Spis_XP_022786297_1) 4.25 7.5 34.7% feature · violin
neuron_Pou4_1 50 Spis_LOC111322300 not mapped 5.63 7.5 32.6% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 9 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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