Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis4614 epidermis2894 gastrodermis_alga_hosting755 gastrodermis_muscle663 neuron_Isl652 neuron_Atoh8628 calicoblast584 gastrodermis_like_2436 neuron_Pou4_2340 gland_2284 neurosecretory_progenitors232 digestive_filaments214 neuron_Pou4_Otp206 neuron_Pou4_1190 germline_oocytes_1182 neuron_Pou4_Gsx162 immune_3142 neuron_Isl_Nkx6136 immune_1126 gland_1_Xbp121 gland_3117 germline_oocytes_273 immune_455 immune_252 cnidocyte38

Showing the cell type that Spis_XP_022802425_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
neurosecretory_progenitors 1 PFX34973.1 (Spis_XP_022792045_1) 2.18 21.6 99.6% feature · violin
neurosecretory_progenitors 2 PFX18144.1 (Spis_XP_022802425_1) 2.11 21.6 99.6% feature · violin
neurosecretory_progenitors 3 Spis_XP_022803407_1 not mapped 1.97 20.8 99.1% feature · violin
neurosecretory_progenitors 4 Spis_LOC111336533 not mapped 1.71 20.6 99.1% feature · violin
neurosecretory_progenitors 5 PFX22333.1 (Spis_XP_022795841_1) 1.73 20.4 99.6% feature · violin
neurosecretory_progenitors 6 PFX14097.1 (Spis_XP_022808232_1) 2.00 20.3 98.3% feature · violin
neurosecretory_progenitors 7 PFX23043.1 (Spis_XP_022794734_1) 1.84 20.3 100.0% feature · violin
neurosecretory_progenitors 8 PFX22982.1 (Spis_XP_022794851_1) 1.63 20.2 99.6% feature · violin
neurosecretory_progenitors 9 PFX22613.1 (Spis_XP_022795432_1) 2.13 20.2 98.3% feature · violin
neurosecretory_progenitors 10 PFX28186.1 (Spis_XP_022786318_1) 1.72 20.1 99.1% feature · violin
neurosecretory_progenitors 11 PFX32257.1 (Spis_XP_022779560_1) 1.83 20.0 98.7% feature · violin
neurosecretory_progenitors 12 PFX26817.1 (Spis_XP_022788653_1) 1.70 19.7 99.1% feature · violin
neurosecretory_progenitors 13 PFX22292.1 (Spis_XP_022795875_1) 1.74 19.5 100.0% feature · violin
neurosecretory_progenitors 14 PFX23892.1 (Spis_XP_022793447_1) 1.76 19.5 98.7% feature · violin
neurosecretory_progenitors 15 PFX26729.1 (Spis_XP_022788785_1) 2.21 19.5 96.1% feature · violin
neurosecretory_progenitors 16 PFX30983.1 (Spis_XP_022781785_1) 2.20 19.4 97.4% feature · violin
neurosecretory_progenitors 17 PFX25865.1 (Spis_XP_022790298_1) 1.78 19.4 97.4% feature · violin
neurosecretory_progenitors 18 PFX34121.1 (Spis_XP_022788937_1) 2.01 19.4 97.0% feature · violin
neurosecretory_progenitors 19 PFX19235.1 (Spis_XP_022800712_1) 1.99 19.4 98.3% feature · violin
neurosecretory_progenitors 20 PFX16354.1 (Spis_XP_022805145_1) 1.69 19.3 99.1% feature · violin
neurosecretory_progenitors 21 PFX19760.1 (Spis_XP_022799860_1) 1.61 19.3 98.7% feature · violin
neurosecretory_progenitors 22 PFX29347.1 (Spis_XP_022784451_1) 1.56 19.1 99.1% feature · violin
neurosecretory_progenitors 23 PFX25609.1 (Spis_XP_022790668_1) 1.63 18.9 100.0% feature · violin
neurosecretory_progenitors 24 Spis_XP_022809737_1 not mapped 1.43 18.9 100.0% feature · violin
neurosecretory_progenitors 25 PFX26943.1 (Spis_XP_022788440_1) 1.91 18.9 96.6% feature · violin
neurosecretory_progenitors 26 PFX17771.1 (Spis_XP_022802978_1) 1.86 18.9 97.8% feature · violin
neurosecretory_progenitors 27 PFX22935.1 (Spis_XP_022800921_1) 1.76 18.8 98.3% feature · violin
neurosecretory_progenitors 28 PFX22655.1 (Spis_XP_022795354_1) 1.82 18.8 99.1% feature · violin
neurosecretory_progenitors 29 Spis_XP_022806335_1 not mapped 1.90 18.8 97.4% feature · violin
neurosecretory_progenitors 30 Spis_XP_022791252_1 not mapped 1.70 18.7 97.8% feature · violin
neurosecretory_progenitors 31 PFX30964.1 (Spis_XP_022781772_1) 1.82 18.6 99.1% feature · violin
neurosecretory_progenitors 32 PFX16655.1 (Spis_XP_022804714_1) 1.77 18.5 97.4% feature · violin
neurosecretory_progenitors 33 PFX21775.1 (Spis_XP_022796666_1) 1.69 18.4 96.1% feature · violin
neurosecretory_progenitors 34 PFX15594.1 (Spis_XP_022806261_1) 2.11 18.3 94.4% feature · violin
neurosecretory_progenitors 35 Spis_XP_022789645_1 not mapped 1.61 17.9 98.3% feature · violin
neurosecretory_progenitors 36 PFX22217.1 (Spis_XP_022795971_1) 1.96 17.9 95.7% feature · violin
neurosecretory_progenitors 37 PFX20246.1 (Spis_XP_022799098_1) 1.86 17.8 97.0% feature · violin
neurosecretory_progenitors 38 PFX20492.1 (Spis_XP_022798699_1) 2.13 17.7 93.1% feature · violin
neurosecretory_progenitors 39 PFX15544.1 (Spis_XP_022806341_1) 1.78 17.6 97.0% feature · violin
neurosecretory_progenitors 40 PFX21901.1 (Spis_XP_022796509_1) 2.62 17.4 87.9% feature · violin
neurosecretory_progenitors 41 PFX31225.1 (Spis_XP_022781378_1) 1.90 17.4 95.7% feature · violin
neurosecretory_progenitors 42 PFX28752.1 (Spis_XP_022785378_1) 1.53 17.3 97.0% feature · violin
neurosecretory_progenitors 43 PFX28574.1 (Spis_XP_022785729_1) 1.67 17.3 96.6% feature · violin
neurosecretory_progenitors 44 PFX33947.1 (Spis_XP_022793355_1) 1.77 17.0 95.7% feature · violin
neurosecretory_progenitors 45 PFX14613.1 (Spis_XP_022807548_1) 2.05 16.9 90.1% feature · violin
neurosecretory_progenitors 46 PFX34537.1 (Spis_XP_022783080_1) 1.69 16.8 96.1% feature · violin
neurosecretory_progenitors 47 PFX24638.1 (Spis_XP_022792252_1) 1.60 16.8 95.7% feature · violin
neurosecretory_progenitors 48 PFX33179.1 (Spis_XP_022803823_1) 1.48 16.7 98.3% feature · violin
neurosecretory_progenitors 49 PFX28181.1 (Spis_XP_022786330_1) 1.54 16.7 96.6% feature · violin
neurosecretory_progenitors 50 PFX17668.1 (Spis_XP_022803137_1) 2.11 16.5 88.8% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 6 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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