Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis4614 epidermis2894 gastrodermis_alga_hosting755 gastrodermis_muscle663 neuron_Isl652 neuron_Atoh8628 calicoblast584 gastrodermis_like_2436 neuron_Pou4_2340 gland_2284 neurosecretory_progenitors232 digestive_filaments214 neuron_Pou4_Otp206 neuron_Pou4_1190 germline_oocytes_1182 neuron_Pou4_Gsx162 immune_3142 neuron_Isl_Nkx6136 immune_1126 gland_1_Xbp121 gland_3117 germline_oocytes_273 immune_455 immune_252 cnidocyte38

Showing the cell type that Spis_XP_022806341_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
gland_2 1 PFX30728.1 (Spis_XP_022782200_1) 0.60 12.7 100.0% feature · violin
gland_2 2 PFX34205.1 (Spis_XP_022788482_1) 3.89 8.3 32.4% feature · violin
gland_2 3 Spis_XP_022794056_1 not mapped 3.29 8.2 34.2% feature · violin
gland_2 4 Spis_orphan_peak_13055 not mapped 2.59 8.1 37.7% feature · violin
gland_2 5 Spis_XP_022798520_1 not mapped 2.17 7.5 39.1% feature · violin
gland_2 6 Spis_XP_022799130_1 not mapped 3.48 7.3 29.2% feature · violin
gland_2 7 Spis_LOC111321484 not mapped 5.46 6.4 23.2% feature · violin
gland_2 8 PFX31226.1 (Spis_XP_022781377_1) 1.83 6.1 34.2% feature · violin
gland_2 9 PFX28119.1 (Spis_XP_022786448_1) 0.47 6.1 82.0% feature · violin
gland_2 10 PFX16916.1 (Spis_XP_022804280_1) 0.55 5.8 75.0% feature · violin
gland_2 11 Spis_XP_022789645_1 not mapped 0.34 5.4 86.3% feature · violin
gland_2 12 PFX31786.1 (Spis_XP_022780388_1) 2.51 5.2 23.6% feature · violin
gland_2 13 Spis_LOC111340571 not mapped 6.50 5.0 17.6% feature · violin
gland_2 14 PFX20598.1 (Spis_XP_022798551_1) 7.26 4.9 17.3% feature · violin
gland_2 15 PFX19251.1 (Spis_XP_022800684_1) 7.55 4.8 16.9% feature · violin
gland_2 16 PFX33179.1 (Spis_XP_022803823_1) 0.31 4.8 87.0% feature · violin
gland_2 17 PFX18144.1 (Spis_XP_022802425_1) 0.28 4.7 85.2% feature · violin
gland_2 18 PFX15167.1 (Spis_XP_022806802_1) 7.45 4.6 16.2% feature · violin
gland_2 19 PFX34322.1 (Spis_XP_022785869_1) 5.36 4.6 18.7% feature · violin
gland_2 20 Spis_LOC111330475 not mapped 1.95 4.6 31.7% feature · violin
gland_2 21 Spis_XP_022778417_1 not mapped 7.22 4.4 15.5% feature · violin
gland_2 22 PFX26972.1 (Spis_XP_022788400_1) 3.00 4.2 18.0% feature · violin
gland_2 23 PFX33113.1 (Spis_XP_022805658_1) 2.92 4.2 17.6% feature · violin
gland_2 24 PFX23043.1 (Spis_XP_022794734_1) 0.21 4.0 87.0% feature · violin
gland_2 25 PFX21364.1 (Spis_XP_022797427_1) 0.39 4.0 62.0% feature · violin
gland_2 26 Spis_LOC111327148 not mapped 5.34 3.9 14.1% feature · violin
gland_2 27 PFX35056.1 (Spis_XP_022805607_1) 5.10 3.9 14.1% feature · violin
gland_2 28 Spis_XP_022809737_1 not mapped 0.20 3.7 93.3% feature · violin
gland_2 29 Spis_orphan_peak_5476 not mapped 1.71 3.7 23.6% feature · violin
gland_2 30 PFX28111.1 (Spis_XP_022786435_1) 0.94 3.7 35.2% feature · violin
gland_2 31 PFX35027.1 (Spis_XP_022777808_1) 2.66 3.7 15.8% feature · violin
gland_2 32 PFX18581.1 (Spis_XP_022801709_1) 5.47 3.6 12.7% feature · violin
gland_2 33 PFX16393.1 (Spis_XP_022805062_1) 2.07 3.6 17.3% feature · violin
gland_2 34 PFX15544.1 (Spis_XP_022806341_1) 0.10 3.5 73.9% feature · violin
gland_2 35 Spis_orphan_peak_5483 not mapped 1.63 3.5 18.3% feature · violin
gland_2 36 PFX24452.1 (Spis_XP_022792541_1) 2.75 3.4 14.4% feature · violin
gland_2 37 PFX31548.1 (Spis_XP_022780833_1) 5.73 3.4 12.0% feature · violin
gland_2 38 PFX24075.1 (Spis_XP_022793172_1) 4.45 3.4 12.3% feature · violin
gland_2 39 Spis_LOC111335082 not mapped 4.02 3.3 12.7% feature · violin
gland_2 40 PFX31547.1 (Spis_XP_022780698_1) 2.58 3.3 14.4% feature · violin
gland_2 41 PFX19324.1 (Spis_XP_022800594_1) 3.61 3.2 12.3% feature · violin
gland_2 42 PFX34721.1 (Spis_XP_022780503_1) 2.54 3.1 13.7% feature · violin
gland_2 43 Spis_orphan_peak_12830 not mapped 8.14 3.1 10.9% feature · violin
gland_2 44 PFX17794.1 (Spis_XP_022802924_1) 2.00 3.1 15.8% feature · violin
gland_2 45 PFX29347.1 (Spis_XP_022784451_1) 0.08 3.1 87.7% feature · violin
gland_2 46 PFX28075.1 (Spis_XP_022786521_1) 2.20 3.1 14.8% feature · violin
gland_2 47 PFX22655.1 (Spis_XP_022795354_1) 0.09 3.0 80.3% feature · violin
gland_2 48 PFX22640.1 (Spis_XP_022795331_1) 3.09 3.0 12.0% feature · violin
gland_2 49 Spis_XP_022801100_1 not mapped 5.50 3.0 10.6% feature · violin
gland_2 50 PFX30983.1 (Spis_XP_022781785_1) 0.12 2.9 69.7% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 16 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

TOP