Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

Cell type: all gastrodermis4614 epidermis2894 gastrodermis_alga_hosting755 gastrodermis_muscle663 neuron_Isl652 neuron_Atoh8628 calicoblast584 gastrodermis_like_2436 neuron_Pou4_2340 gland_2284 neurosecretory_progenitors232 digestive_filaments214 neuron_Pou4_Otp206 neuron_Pou4_1190 germline_oocytes_1182 neuron_Pou4_Gsx162 immune_3142 neuron_Isl_Nkx6136 immune_1126 gland_1_Xbp121 gland_3117 germline_oocytes_273 immune_455 immune_252 cnidocyte38

Showing the cell type that Spis_XP_022810024_1 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
gland_1_Xbp 1 PFX23953.1 (Spis_XP_022793367_1) 12.76 18.1 95.9% feature · violin
gland_1_Xbp 2 Spis_LOC111338854 not mapped 12.16 16.4 86.8% feature · violin
gland_1_Xbp 3 PFX15639.1 (Spis_XP_022806173_1) 11.80 15.8 83.5% feature · violin
gland_1_Xbp 4 PFX14732.1 (Spis_Spis21098_1) 10.36 14.9 78.5% feature · violin
gland_1_Xbp 5 PFX12057.1 (Spis_XP_022781900_1) 11.88 14.7 77.7% feature · violin
gland_1_Xbp 6 PFX21102.1 (Spis_XP_022797811_1) 8.75 13.8 73.6% feature · violin
gland_1_Xbp 7 Spis_orphan_peak_15380 not mapped 11.28 12.8 67.8% feature · violin
gland_1_Xbp 8 Spis_XP_022795038_1 not mapped 9.07 12.6 66.9% feature · violin
gland_1_Xbp 9 PFX14846.1 (Spis_XP_022807239_1) 12.50 12.5 66.1% feature · violin
gland_1_Xbp 10 Spis_XP_022806178_1 not mapped 12.30 12.2 64.5% feature · violin
gland_1_Xbp 11 Spis_XP_022810620_1 not mapped 12.34 11.9 62.8% feature · violin
gland_1_Xbp 12 Spis_XP_022808761_1 not mapped 31.72 11.3 59.5% feature · violin
gland_1_Xbp 13 PFX30811.1 (Spis_XP_022788045_1) 10.49 10.5 55.4% feature · violin
gland_1_Xbp 14 Spis_XP_022810024_1 not mapped 7.50 10.4 55.4% feature · violin
gland_1_Xbp 15 PFX24137.1 (Spis_XP_022793036_1) 8.70 10.4 55.4% feature · violin
gland_1_Xbp 16 PFX14234.1 (Spis_XP_022808045_1) 9.52 10.0 52.9% feature · violin
gland_1_Xbp 17 PFX22026.1 (Spis_XP_022796312_1) 8.45 9.9 52.9% feature · violin
gland_1_Xbp 18 Spis_LOC111333244 not mapped 8.83 9.9 52.9% feature · violin
gland_1_Xbp 19 PFX25625.1 (Spis_XP_022790632_1) 8.29 9.8 52.1% feature · violin
gland_1_Xbp 20 PFX35001.1 (Spis_XP_022793587_1) 9.99 9.7 51.2% feature · violin
gland_1_Xbp 21 Spis_XP_022777790_1 not mapped 11.90 9.6 50.4% feature · violin
gland_1_Xbp 22 Spis_orphan_peak_9394 not mapped 11.57 9.1 47.9% feature · violin
gland_1_Xbp 23 PFX31802.1 (Spis_XP_022780402_1) 5.09 8.5 47.1% feature · violin
gland_1_Xbp 24 PFX27377.1 (Spis_XP_022787718_1) 11.53 8.3 43.8% feature · violin
gland_1_Xbp 25 Spis_LOC111319577 not mapped 9.82 8.3 43.8% feature · violin
gland_1_Xbp 26 PFX30229.1 (Spis_XP_022782935_1) 8.55 8.1 43.0% feature · violin
gland_1_Xbp 27 Spis_LOC111332223 not mapped 6.96 8.1 43.0% feature · violin
gland_1_Xbp 28 Spis_orphan_peak_12721 not mapped 3.83 7.9 47.1% feature · violin
gland_1_Xbp 29 PFX12221.1 (Spis_XP_022810563_1) 8.33 7.3 38.8% feature · violin
gland_1_Xbp 30 PFX26229.1 (Spis_XP_022789629_1) 2.76 6.9 47.1% feature · violin
gland_1_Xbp 31 PFX21800.1 (Spis_XP_022796606_1) 30.01 6.9 36.4% feature · violin
gland_1_Xbp 32 PFX28111.1 (Spis_XP_022786435_1) 1.91 6.8 59.5% feature · violin
gland_1_Xbp 33 PFX13769.1 (Spis_XP_022808661_1) 9.21 6.7 35.5% feature · violin
gland_1_Xbp 34 Spis_XP_022779854_1 not mapped 1.41 6.6 75.2% feature · violin
gland_1_Xbp 35 Spis_XP_022806782_1 not mapped 9.34 6.6 34.7% feature · violin
gland_1_Xbp 36 Spis_XP_022806174_1 not mapped 11.11 6.4 33.9% feature · violin
gland_1_Xbp 37 PFX16370.1 (Spis_Spis19351_1) 9.73 6.4 33.9% feature · violin
gland_1_Xbp 38 Spis_orphan_peak_17226 not mapped 6.27 6.3 33.9% feature · violin
gland_1_Xbp 39 PFX22802.1 (Spis_XP_022796952_1) 5.56 6.2 33.9% feature · violin
gland_1_Xbp 40 PFX25201.1 (Spis_XP_022791340_1) 10.43 6.1 32.2% feature · violin
gland_1_Xbp 41 PFX15130.1 (Spis_XP_022806864_1) 9.32 6.1 32.2% feature · violin
gland_1_Xbp 42 PFX21334.1 (Spis_XP_022797482_1) 1.41 6.0 62.8% feature · violin
gland_1_Xbp 43 PFX24139.1 (Spis_XP_022793037_1) 9.50 5.9 31.4% feature · violin
gland_1_Xbp 44 Spis_XP_022806869_1 not mapped 8.64 5.8 30.6% feature · violin
gland_1_Xbp 45 PFX22806.1 (Spis_XP_022795130_1) 7.78 5.8 30.6% feature · violin
gland_1_Xbp 46 Spis_XP_022799056_1 not mapped 10.32 5.6 29.8% feature · violin
gland_1_Xbp 47 PFX26670.1 (Spis_XP_022808163_1) 7.93 5.6 29.8% feature · violin
gland_1_Xbp 48 Spis_XP_022808226_1 not mapped 8.11 5.6 29.8% feature · violin
gland_1_Xbp 49 PFX17091.1 (Spis_XP_022804043_1) 11.97 5.5 28.9% feature · violin
gland_1_Xbp 50 PFX23952.1 (Spis_XP_022793369_1) 2.61 5.5 37.2% feature · violin

Where an identifier could be established, the gene is shown as the accession the rest of this site uses for Stylophora pistillata, with the source dataset's own ID in parentheses (hover for why; the rule and the coverage are in the manual). Those IDs are the keys the underlying data files use, so they are what the links here carry. 20 of the 50 identifiers listed on this page carry a not mapped mark: they are the source study's own gene models, and no accession could be justified for them. They are left as they are rather than given a best guess.

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