Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 17 gene–annotation pairs matching GO:0000470 across 1 genomes (restricted to APOCU) · 248 ms.

Species with hits:← all speciesAPOCU 17
SpeciesGene IDGene Ontology termMatchSourceBrowser
APOCUevm.model.Ap6.2584GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap9.1198GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap12.383GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap14.724GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap1.1468.1.5f15dfe3GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap4.7330GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap6.1534_evm.model.Ap6.1537GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap1.1468GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap2.2610.1.5f15e1d9GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap2.1639GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap1.2782GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap2.2609GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap2.2610GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap6.1534_evm.model.Ap6.1537.1.5f168c87GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap12.537GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap12.2349GO:0000470maturation of LSU-rRNAInterproscanJBrowse
APOCUevm.model.Ap2.1508GO:0000470maturation of LSU-rRNAInterproscanJBrowse

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