Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching IPR003682 across 1 genomes (restricted to Hydra viridissima) · 8 ms.

Species with hits:← all speciesHydra viridissima 5
SpeciesGene IDInterPro termMatchSourceBrowser
Hydra viridissimaBRAKERKREP00000022530.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022530.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022530.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022530.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022530.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse

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