Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 39 gene–annotation pairs matching IPR003682 across 148 genomes · 24 ms.

Species with hits:Hydra oligactis 24Cassiopea xamachana 5Hydra viridissima 5Montipora grisea 4Turritopsis rubra 1
SpeciesGene IDInterPro termMatchSourceBrowser
Cassiopea xamachanaCxam_g2990.t1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Cassiopea xamachanaCxam_g2990.t1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Cassiopea xamachanaCxam_g2990.t1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Cassiopea xamachanaCxam_g2990.t1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Cassiopea xamachanaCxam_g2990.t1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00014.G9761IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00014.G9761IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00014.G9761IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00014.G9761IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00014.G9761IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00001.G52851IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00001.G52851IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00001.G52851IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00001.G52851IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00256.G40351IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00256.G40351IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00256.G40351IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00256.G40351IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00256.G40351IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00256.G40351IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00643.G15971IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00643.G15971IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00643.G15971IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00643.G15971IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00002.G20189IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00002.G20189IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00002.G20189IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00002.G20189IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00002.G20189IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022530.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022530.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022530.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022530.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022530.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Montipora griseaANN30549-RAIPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Montipora griseaANN30549-RAIPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Montipora griseaANN30549-RAIPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Montipora griseaANN30549-RAIPR003682rRNA small subunit methyltransferase GInterproscanJBrowse
Turritopsis rubraBRAKERIOWP00000003478.1IPR003682rRNA small subunit methyltransferase GInterproscanJBrowse

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