Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | jsCasXama1.1 |
|---|---|
| Assembly level | Chromosome |
| Assembled by | GCA_964235115.1 |
| Genome size | 311.01 |
| Scaffolds | 561 |
| Contigs | 3495 |
| Scaffold N50 | 15734089 |
| Contig N50 | 144866 |
| GC content | 37 |
| BUSCO | 58.59% |
| Protein-coding genes | 31,459 |
| Proteins | 31,459 |
| Chromosomes | 20 |
| WGS accession | CAXRZQ01 |
| BioProject | PRJEB79060 |
| Submitter | WELLCOME SANGER INSTITUTE |
| Year | 2024 |
| Reference | Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa) GigaScience [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-16 18:45). If a data type is listed as unavailable for Cassiopea xamachana, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
