Aurelia coerulea

Species code ACOER · Class Scyphozoa · NCBI Taxonomy 1962980
10 of 15 data types available See this row in the coverage matrix →

Data available for this species

Genome assembly

✓ available

Assembled genome (size, level, N50, BUSCO)

Gene annotation

✓ available

Predicted gene models with CDS / transcript / protein sequences

Functional annotation

✓ available

InterPro, Pfam, PANTHER, GO and KEGG assignments

Gene family (orthogroup)

✓ available

OrthoFinder orthogroups and TF / ubiquitin families

Bulk transcriptome

✓ 1 record

RNA-seq samples with expression values (TPM)

Co-expression network

✓ 2 records

Positive / negative co-expression edges

Single-cell

✓ 7 records

scRNA-seq datasets, cell atlas and marker genes

Proteome

— not available

Mass-spectrometry proteomics samples

Epigenome

— not available

DNA methylation, miRNA-seq, ATAC-seq, ChIP-seq

Metagenome

✓ 56 records

Host-associated metagenomic samples

Phenotype

— not available

Trait measurements with geo-referencing

Paleobiology

— not available

Fossil occurrences and stratigraphic records

Mitogenome

✓ 21 records

Mitochondrial gene annotations

Transposable elements

— not available

Repeat annotation of assembled genomes

Genome browser

✓ available

Interactive JBrowse track for the assembly

Assembly record

Assembly nameASM3956686v1
Assembly levelChromosome
Assembled byGCA_039566865.1
Genome size548.32
Scaffolds304
Contigs312
Scaffold N5024384169
Contig N5023520599
GC content37
BUSCOC:87.0%[S:86.7%,D:0.3%],F:6.6%,M:6.4%
Protein-coding genes26,777
Proteins26,777
Chromosomes22
WGS accessionJAVEOB01
BioProjectPRJNA1005405
SubmitterYantai Institute of Coastal Zone Research
Year2024
ReferenceChromosome-level genome assembly and annotation of the moon jellyfish Aurelia coerulea Scientific Data [link]

Other Scyphozoa species

Availability shown here is recomputed from the live database every hour (last built 2026-09-17 23:33). If a data type is listed as unavailable for Aurelia coerulea, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.

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