Chrysaora quinquecirrha

Species code CQUIN · Class Scyphozoa · NCBI Taxonomy 6148
7 of 15 data types available See this row in the coverage matrix →

Data available for this species

Genome assembly

✓ available

Assembled genome (size, level, N50, BUSCO)

Gene annotation

✓ available

Predicted gene models with CDS / transcript / protein sequences

Functional annotation

✓ available

InterPro, Pfam, PANTHER, GO and KEGG assignments

Gene family (orthogroup)

✓ available

OrthoFinder orthogroups and TF / ubiquitin families

Bulk transcriptome

— not available

RNA-seq samples with expression values (TPM)

Co-expression network

— not available

Positive / negative co-expression edges

Single-cell

— not available

scRNA-seq datasets, cell atlas and marker genes

Proteome

— not available

Mass-spectrometry proteomics samples

Epigenome

— not available

DNA methylation, miRNA-seq, ATAC-seq, ChIP-seq

Metagenome

— not available

Host-associated metagenomic samples

Phenotype

✓ 21 records

Trait measurements with geo-referencing

Paleobiology

— not available

Fossil occurrences and stratigraphic records

Mitogenome

✓ 19 records

Mitochondrial gene annotations

Transposable elements

— not available

Repeat annotation of assembled genomes

Genome browser

✓ available

Interactive JBrowse track for the assembly

Assembly record

Assembly nameASM1452633v2
Assembly levelScaffold
Assembled byGCA_014526335.2
Genome size321.76
Scaffolds1880
Contigs5123
Scaffold N503825607
Contig N50227000
GC content37.5
BUSCOC:72.7%[S:59.5%,D:13.2%],F:8.5%,M:18.8%
Protein-coding genes-
Proteins-
Chromosomes-
WGS accessionJACTAT01
BioProjectPRJNA658826
SubmitterCenter for Ecological and Environmental Sciences
Year2020
ReferenceHigh-continuity genome assembly of the jellyfish Chrysaora quinquecirrha Zoological Research [link]

Other Scyphozoa species

Availability shown here is recomputed from the live database every hour (last built 2026-09-16 20:11). If a data type is listed as unavailable for Chrysaora quinquecirrha, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.

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