Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching IPR036959 across 1 genomes (restricted to Astrangia poculata) · 2 ms.

Species with hits:← all speciesAstrangia poculata 4
SpeciesGene IDInterPro termMatchSourceBrowser
Astrangia poculataevm.model.Ap5.261IPR036959Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyInterproscanJBrowse
Astrangia poculataevm.model.Ap1.2967IPR036959Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyInterproscanJBrowse
Astrangia poculataevm.model.Ap10.648IPR036959Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyInterproscanJBrowse
Astrangia poculataevm.model.Ap5.261.1.5f15e2c3IPR036959Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyInterproscanJBrowse

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