Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching IPR048979 across 1 genomes (restricted to Lophelia pertusa) · 7 ms.

Species with hits:← all speciesLophelia pertusa 6
SpeciesGene IDInterPro termMatchSourceBrowser
Lophelia pertusaOS493_036294-T1IPR048979AP5B1, middle domainInterproscanJBrowse
Lophelia pertusaOS493_036313-T1IPR048979AP5B1, middle domainInterproscanJBrowse
Lophelia pertusaOS493_036300-T1IPR048979AP5B1, middle domainInterproscanJBrowse
Lophelia pertusaOS493_036300-T1IPR048979AP5B1, middle domainInterproscanJBrowse
Lophelia pertusaOS493_036315-T1IPR048979AP5B1, middle domainInterproscanJBrowse
Lophelia pertusaOS493_036315-T1IPR048979AP5B1, middle domainInterproscanJBrowse

TOP