Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PTHR45897 across 1 genomes (restricted to LPERT) · 84 ms.

Species with hits:← all speciesLPERT 5
SpeciesGene IDPANTHER termMatchSourceBrowser
LPERTOS493_014745-T1PTHR45897HIGH-AFFINITY CHOLINE TRANSPORTER 1InterproscanJBrowse
LPERTOS493_014744-T1PTHR45897HIGH-AFFINITY CHOLINE TRANSPORTER 1InterproscanJBrowse
LPERTOS493_014741-T1PTHR45897HIGH-AFFINITY CHOLINE TRANSPORTER 1InterproscanJBrowse
LPERTOS493_014743-T1PTHR45897HIGH-AFFINITY CHOLINE TRANSPORTER 1InterproscanJBrowse
LPERTOS493_014742-T1PTHR45897HIGH-AFFINITY CHOLINE TRANSPORTER 1InterproscanJBrowse

TOP