Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching PTHR47210 across 148 genomes · 28 ms.

Species with hits:Eunicella cavolini 1Hydra viridissima 1Orbicella faveolata 1Paramuricea clavata 1
SpeciesGene IDPANTHER termMatchSourceBrowser
Eunicella cavoliniENSLDHP00000030891.1PTHR47210MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATEDInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000027891.1PTHR47210MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATEDInterproscanJBrowse
Orbicella faveolataXP_020623506.1PTHR47210MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATEDInterproscanJBrowse
Paramuricea clavataCAB3982553.1PTHR47210MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATEDInterproscanJBrowse

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